Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.45■□□□□ 0.86
CGB1A6NKQ9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CGB1A6NKQ9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CGB1A6NKQ9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CGB1A6NKQ9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CGB1A6NKQ9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 DUX4L28-201ENST00000623687 678 ntBASIC20.43■□□□□ 0.86
CGB1A6NKQ9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CGB1A6NKQ9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CGB1A6NKQ9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CGB1A6NKQ9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.42■□□□□ 0.86
CGB1A6NKQ9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CGB1A6NKQ9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CGB1A6NKQ9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CGB1A6NKQ9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CGB1A6NKQ9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.4■□□□□ 0.86
CGB1A6NKQ9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CGB1A6NKQ9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CGB1A6NKQ9 AC100797.4-201ENST00000631653 1827 ntBASIC20.4■□□□□ 0.86
CGB1A6NKQ9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CGB1A6NKQ9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CGB1A6NKQ9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.39■□□□□ 0.85
CGB1A6NKQ9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CGB1A6NKQ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.39■□□□□ 0.85
CGB1A6NKQ9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CGB1A6NKQ9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CGB1A6NKQ9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CGB1A6NKQ9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CGB1A6NKQ9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CGB1A6NKQ9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CGB1A6NKQ9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CGB1A6NKQ9 MIR6090-201ENST00000622481 60 ntBASIC20.37■□□□□ 0.85
CGB1A6NKQ9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CGB1A6NKQ9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CGB1A6NKQ9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CGB1A6NKQ9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CGB1A6NKQ9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CGB1A6NKQ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.36■□□□□ 0.85
CGB1A6NKQ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CGB1A6NKQ9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGB1A6NKQ9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CGB1A6NKQ9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.35■□□□□ 0.85
CGB1A6NKQ9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGB1A6NKQ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
CGB1A6NKQ9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGB1A6NKQ9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.34■□□□□ 0.85
CGB1A6NKQ9 AC108673.1-201ENST00000510422 1159 ntBASIC20.34■□□□□ 0.85
CGB1A6NKQ9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.33■□□□□ 0.85
CGB1A6NKQ9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGB1A6NKQ9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGB1A6NKQ9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGB1A6NKQ9 AC135983.2-203ENST00000454486 1613 ntBASIC20.31■□□□□ 0.84
CGB1A6NKQ9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGB1A6NKQ9 BX255925.1-201ENST00000566954 1854 ntBASIC20.31■□□□□ 0.84
CGB1A6NKQ9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CGB1A6NKQ9 MIR3665-201ENST00000578708 105 ntBASIC20.31■□□□□ 0.84
CGB1A6NKQ9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CGB1A6NKQ9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGB1A6NKQ9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.3■□□□□ 0.84
CGB1A6NKQ9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.3■□□□□ 0.84
CGB1A6NKQ9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGB1A6NKQ9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.29■□□□□ 0.84
CGB1A6NKQ9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.29■□□□□ 0.84
CGB1A6NKQ9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGB1A6NKQ9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CGB1A6NKQ9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGB1A6NKQ9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGB1A6NKQ9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CGB1A6NKQ9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CGB1A6NKQ9 AP006261.1-201ENST00000584783 668 ntBASIC20.28■□□□□ 0.84
CGB1A6NKQ9 AL121749.1-202ENST00000609313 2153 ntBASIC20.28■□□□□ 0.84
CGB1A6NKQ9 WHAMMP2-203ENST00000563942 1603 ntBASIC20.27■□□□□ 0.84
CGB1A6NKQ9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CGB1A6NKQ9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.26■□□□□ 0.83
CGB1A6NKQ9 LINC01003-201ENST00000564834 1764 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms