Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 AC135731.1-201ENST00000569415 2548 ntBASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-1A0A0K0K1D8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-1A0A0K0K1D8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRBV6-1A0A0K0K1D8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.2■□□□□ 0.66
TRBV6-1A0A0K0K1D8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-1A0A0K0K1D8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-1A0A0K0K1D8 AC127502.1-201ENST00000399971 1502 ntBASIC19.2■□□□□ 0.66
TRBV6-1A0A0K0K1D8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-1A0A0K0K1D8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRBV6-1A0A0K0K1D8 AL449106.1-201ENST00000608517 1980 ntBASIC19.19■□□□□ 0.66
TRBV6-1A0A0K0K1D8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-1A0A0K0K1D8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-1A0A0K0K1D8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRBV6-1A0A0K0K1D8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRBV6-1A0A0K0K1D8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV6-1A0A0K0K1D8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-1A0A0K0K1D8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-1A0A0K0K1D8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.18■□□□□ 0.66
TRBV6-1A0A0K0K1D8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-1A0A0K0K1D8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-1A0A0K0K1D8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV6-1A0A0K0K1D8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRBV6-1A0A0K0K1D8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-1A0A0K0K1D8 AP002414.2-202ENST00000590929 1450 ntBASIC19.16■□□□□ 0.66
TRBV6-1A0A0K0K1D8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-1A0A0K0K1D8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV6-1A0A0K0K1D8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRBV6-1A0A0K0K1D8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV6-1A0A0K0K1D8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-1A0A0K0K1D8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-1A0A0K0K1D8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-1A0A0K0K1D8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-1A0A0K0K1D8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV6-1A0A0K0K1D8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-1A0A0K0K1D8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV6-1A0A0K0K1D8 AC091060.1-201ENST00000623524 1766 ntBASIC19.14■□□□□ 0.66
TRBV6-1A0A0K0K1D8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-1A0A0K0K1D8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-1A0A0K0K1D8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-1A0A0K0K1D8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV6-1A0A0K0K1D8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-1A0A0K0K1D8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-1A0A0K0K1D8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-1A0A0K0K1D8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.11■□□□□ 0.65
TRBV6-1A0A0K0K1D8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-1A0A0K0K1D8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 AC100797.4-201ENST00000631653 1827 ntBASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-1A0A0K0K1D8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-1A0A0K0K1D8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-1A0A0K0K1D8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-1A0A0K0K1D8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-1A0A0K0K1D8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-1A0A0K0K1D8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-1A0A0K0K1D8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV6-1A0A0K0K1D8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV6-1A0A0K0K1D8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRBV6-1A0A0K0K1D8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-1A0A0K0K1D8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV6-1A0A0K0K1D8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-1A0A0K0K1D8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-1A0A0K0K1D8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV6-1A0A0K0K1D8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.06■□□□□ 0.64
TRBV6-1A0A0K0K1D8 AC145676.1-201ENST00000514988 2004 ntBASIC19.06■□□□□ 0.64
TRBV6-1A0A0K0K1D8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TRBV6-1A0A0K0K1D8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-1A0A0K0K1D8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms