Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC148477.6-201ENST00000623746 465 ntBASIC25.93■■□□□ 1.74
CCDC163A0A0D9SF12 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC163A0A0D9SF12 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC163A0A0D9SF12 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC163A0A0D9SF12 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC163A0A0D9SF12 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC163A0A0D9SF12 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC163A0A0D9SF12 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC163A0A0D9SF12 AC135983.2-203ENST00000454486 1613 ntBASIC25.89■■□□□ 1.74
CCDC163A0A0D9SF12 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC163A0A0D9SF12 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CCDC163A0A0D9SF12 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC163A0A0D9SF12 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.89■■□□□ 1.74
CCDC163A0A0D9SF12 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC163A0A0D9SF12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
CCDC163A0A0D9SF12 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC163A0A0D9SF12 AC060814.1-201ENST00000554326 538 ntBASIC25.88■■□□□ 1.73
CCDC163A0A0D9SF12 AC018358.1-201ENST00000631079 1402 ntBASIC25.88■■□□□ 1.73
CCDC163A0A0D9SF12 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC163A0A0D9SF12 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CCDC163A0A0D9SF12 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC163A0A0D9SF12 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC163A0A0D9SF12 AL033527.3-201ENST00000566366 1196 ntBASIC25.86■■□□□ 1.73
CCDC163A0A0D9SF12 U85056.1-201ENST00000616429 682 ntBASIC25.86■■□□□ 1.73
CCDC163A0A0D9SF12 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC163A0A0D9SF12 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC163A0A0D9SF12 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC163A0A0D9SF12 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CCDC163A0A0D9SF12 WHAMMP2-203ENST00000563942 1603 ntBASIC25.83■■□□□ 1.73
CCDC163A0A0D9SF12 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC163A0A0D9SF12 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC163A0A0D9SF12 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CCDC163A0A0D9SF12 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CCDC163A0A0D9SF12 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC163A0A0D9SF12 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC163A0A0D9SF12 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC163A0A0D9SF12 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC163A0A0D9SF12 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC163A0A0D9SF12 AC127502.1-201ENST00000399971 1502 ntBASIC25.81■■□□□ 1.72
CCDC163A0A0D9SF12 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
CCDC163A0A0D9SF12 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC163A0A0D9SF12 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC163A0A0D9SF12 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC163A0A0D9SF12 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CCDC163A0A0D9SF12 AC110285.7-201ENST00000624417 1536 ntBASIC25.79■■□□□ 1.72
CCDC163A0A0D9SF12 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC163A0A0D9SF12 TSPY13P-201ENST00000338964 914 ntBASIC25.78■■□□□ 1.72
CCDC163A0A0D9SF12 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC163A0A0D9SF12 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC163A0A0D9SF12 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 AC092296.2-201ENST00000589470 999 ntBASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CCDC163A0A0D9SF12 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
CCDC163A0A0D9SF12 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.76■■□□□ 1.71
CCDC163A0A0D9SF12 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC163A0A0D9SF12 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC163A0A0D9SF12 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC163A0A0D9SF12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC163A0A0D9SF12 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC163A0A0D9SF12 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC163A0A0D9SF12 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC163A0A0D9SF12 ECEL1P2-201ENST00000461596 1295 ntBASIC25.73■■□□□ 1.71
CCDC163A0A0D9SF12 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.73■■□□□ 1.71
CCDC163A0A0D9SF12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC163A0A0D9SF12 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.72■■□□□ 1.71
CCDC163A0A0D9SF12 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.72■■□□□ 1.71
CCDC163A0A0D9SF12 KRT18P60-201ENST00000312876 1297 ntBASIC25.71■■□□□ 1.71
CCDC163A0A0D9SF12 ATP5G2P3-201ENST00000429083 425 ntBASIC25.71■■□□□ 1.71
CCDC163A0A0D9SF12 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC163A0A0D9SF12 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC163A0A0D9SF12 MIR219A2-201ENST00000608502 1504 ntBASIC25.71■■□□□ 1.71
CCDC163A0A0D9SF12 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CCDC163A0A0D9SF12 AC004987.1-201ENST00000428627 508 ntBASIC25.7■■□□□ 1.7
CCDC163A0A0D9SF12 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.7■■□□□ 1.7
CCDC163A0A0D9SF12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCDC163A0A0D9SF12 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCDC163A0A0D9SF12 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.7■■□□□ 1.7
CCDC163A0A0D9SF12 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC163A0A0D9SF12 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC163A0A0D9SF12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CCDC163A0A0D9SF12 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC163A0A0D9SF12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC163A0A0D9SF12 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CCDC163A0A0D9SF12 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.68■■□□□ 1.7
CCDC163A0A0D9SF12 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC163A0A0D9SF12 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CCDC163A0A0D9SF12 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC163A0A0D9SF12 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC163A0A0D9SF12 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC163A0A0D9SF12 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC163A0A0D9SF12 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.67■■□□□ 1.7
CCDC163A0A0D9SF12 AC126177.7-201ENST00000547904 679 ntBASIC25.66■■□□□ 1.7
CCDC163A0A0D9SF12 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC163A0A0D9SF12 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CCDC163A0A0D9SF12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC163A0A0D9SF12 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms