Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV12-1A0A0B4J245 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-1A0A0B4J245 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-1A0A0B4J245 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV12-1A0A0B4J245 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 LINC01003-201ENST00000564834 1764 ntBASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-1A0A0B4J245 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 AC091060.1-201ENST00000623524 1766 ntBASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-1A0A0B4J245 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV12-1A0A0B4J245 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV12-1A0A0B4J245 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV12-1A0A0B4J245 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV12-1A0A0B4J245 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-1A0A0B4J245 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
TRAV12-1A0A0B4J245 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-1A0A0B4J245 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV12-1A0A0B4J245 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-1A0A0B4J245 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-1A0A0B4J245 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-1A0A0B4J245 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-1A0A0B4J245 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV12-1A0A0B4J245 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRAV12-1A0A0B4J245 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV12-1A0A0B4J245 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV12-1A0A0B4J245 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-1A0A0B4J245 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-1A0A0B4J245 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV12-1A0A0B4J245 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV12-1A0A0B4J245 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV12-1A0A0B4J245 AP004833.2-201ENST00000532228 1454 ntBASIC17.96■□□□□ 0.47
TRAV12-1A0A0B4J245 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV12-1A0A0B4J245 AC020928.2-201ENST00000588717 2197 ntBASIC17.96■□□□□ 0.46
TRAV12-1A0A0B4J245 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.96■□□□□ 0.46
TRAV12-1A0A0B4J245 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TRAV12-1A0A0B4J245 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV12-1A0A0B4J245 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV12-1A0A0B4J245 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV12-1A0A0B4J245 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV12-1A0A0B4J245 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV12-1A0A0B4J245 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV12-1A0A0B4J245 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV12-1A0A0B4J245 AC145676.1-201ENST00000514988 2004 ntBASIC17.94■□□□□ 0.46
TRAV12-1A0A0B4J245 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV12-1A0A0B4J245 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-1A0A0B4J245 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-1A0A0B4J245 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-1A0A0B4J245 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV12-1A0A0B4J245 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV12-1A0A0B4J245 AC093323.1-202ENST00000635031 2045 ntBASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV12-1A0A0B4J245 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-1A0A0B4J245 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV12-1A0A0B4J245 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV12-1A0A0B4J245 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV12-1A0A0B4J245 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.89■□□□□ 0.46
TRAV12-1A0A0B4J245 AC010864.1-201ENST00000609407 1511 ntBASIC17.89■□□□□ 0.45
TRAV12-1A0A0B4J245 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-1A0A0B4J245 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV12-1A0A0B4J245 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV12-1A0A0B4J245 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-1A0A0B4J245 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV12-1A0A0B4J245 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-1A0A0B4J245 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms