Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV26-1A0A087WT03 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV26-1A0A087WT03 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV26-1A0A087WT03 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV26-1A0A087WT03 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
TRAV26-1A0A087WT03 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV26-1A0A087WT03 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV26-1A0A087WT03 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV26-1A0A087WT03 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV26-1A0A087WT03 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV26-1A0A087WT03 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV26-1A0A087WT03 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV26-1A0A087WT03 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV26-1A0A087WT03 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV26-1A0A087WT03 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV26-1A0A087WT03 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV26-1A0A087WT03 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV26-1A0A087WT03 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV26-1A0A087WT03 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV26-1A0A087WT03 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV26-1A0A087WT03 ABHD17AP4-201ENST00000411545 909 ntBASIC18.2■□□□□ 0.5
TRAV26-1A0A087WT03 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV26-1A0A087WT03 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV26-1A0A087WT03 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV26-1A0A087WT03 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV26-1A0A087WT03 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV26-1A0A087WT03 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV26-1A0A087WT03 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV26-1A0A087WT03 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV26-1A0A087WT03 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV26-1A0A087WT03 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV26-1A0A087WT03 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV26-1A0A087WT03 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV26-1A0A087WT03 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV26-1A0A087WT03 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAV26-1A0A087WT03 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV26-1A0A087WT03 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV26-1A0A087WT03 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV26-1A0A087WT03 ZNRF2P2-203ENST00000454624 420 ntBASIC18.15■□□□□ 0.5
TRAV26-1A0A087WT03 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV26-1A0A087WT03 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV26-1A0A087WT03 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TRAV26-1A0A087WT03 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV26-1A0A087WT03 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV26-1A0A087WT03 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV26-1A0A087WT03 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV26-1A0A087WT03 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV26-1A0A087WT03 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV26-1A0A087WT03 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 LINC00273-201ENST00000539813 1452 ntBASIC18.13■□□□□ 0.49
TRAV26-1A0A087WT03 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV26-1A0A087WT03 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV26-1A0A087WT03 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV26-1A0A087WT03 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV26-1A0A087WT03 AL139393.2-201ENST00000608721 2025 ntBASIC18.1■□□□□ 0.49
TRAV26-1A0A087WT03 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV26-1A0A087WT03 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV26-1A0A087WT03 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV26-1A0A087WT03 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV26-1A0A087WT03 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV26-1A0A087WT03 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV26-1A0A087WT03 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV26-1A0A087WT03 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV26-1A0A087WT03 MIR7108-201ENST00000614319 87 ntBASIC18.09■□□□□ 0.49
TRAV26-1A0A087WT03 ABCB10P3-201ENST00000561950 2166 ntBASIC18.08■□□□□ 0.49
TRAV26-1A0A087WT03 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV26-1A0A087WT03 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms