Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV20-1A0A075B6N2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 AC020928.2-201ENST00000588717 2197 ntBASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV20-1A0A075B6N2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV20-1A0A075B6N2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV20-1A0A075B6N2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV20-1A0A075B6N2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRBV20-1A0A075B6N2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV20-1A0A075B6N2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV20-1A0A075B6N2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
TRBV20-1A0A075B6N2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV20-1A0A075B6N2 BX255925.1-201ENST00000566954 1854 ntBASIC17.19■□□□□ 0.34
TRBV20-1A0A075B6N2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRBV20-1A0A075B6N2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV20-1A0A075B6N2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV20-1A0A075B6N2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV20-1A0A075B6N2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV20-1A0A075B6N2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV20-1A0A075B6N2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV20-1A0A075B6N2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV20-1A0A075B6N2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRBV20-1A0A075B6N2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV20-1A0A075B6N2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRBV20-1A0A075B6N2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV20-1A0A075B6N2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 AL139393.2-201ENST00000608721 2025 ntBASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV20-1A0A075B6N2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV20-1A0A075B6N2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV20-1A0A075B6N2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV20-1A0A075B6N2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV20-1A0A075B6N2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV20-1A0A075B6N2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV20-1A0A075B6N2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV20-1A0A075B6N2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRBV20-1A0A075B6N2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV20-1A0A075B6N2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRBV20-1A0A075B6N2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV20-1A0A075B6N2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV20-1A0A075B6N2 LINC00543-201ENST00000567234 1845 ntBASIC17.12■□□□□ 0.33
TRBV20-1A0A075B6N2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV20-1A0A075B6N2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV20-1A0A075B6N2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV20-1A0A075B6N2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV20-1A0A075B6N2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 AC091060.1-201ENST00000623524 1766 ntBASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV20-1A0A075B6N2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV20-1A0A075B6N2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV20-1A0A075B6N2 AL135925.1-201ENST00000605920 1701 ntBASIC17.09■□□□□ 0.33
TRBV20-1A0A075B6N2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV20-1A0A075B6N2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV20-1A0A075B6N2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV20-1A0A075B6N2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV20-1A0A075B6N2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV20-1A0A075B6N2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV20-1A0A075B6N2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV20-1A0A075B6N2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRBV20-1A0A075B6N2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV20-1A0A075B6N2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms