Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 IMMT-202ENST00000409051 2515 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 POLE3-201ENST00000374169 2109 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 NR2F1-AS1-202ENST00000504474 2868 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP9-4Q9BYQ2 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZFP57-202ENST00000376883 1980 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 PCDHB12-201ENST00000239450 3853 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 KPRP-201ENST00000606109 2492 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC092692.1-201ENST00000623625 2595 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 AL358933.1-201ENST00000565046 2830 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CSPG4P13-202ENST00000567704 4801 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 MLC1-201ENST00000311597 3933 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 HKDC1-201ENST00000354624 3689 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 INPP5K-203ENST00000406424 3194 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 AL445471.2-201ENST00000568143 2443 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 INO80-211ENST00000616814 4272 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 AL035681.1-201ENST00000441316 2500 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 MYH16-203ENST00000439784 5836 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 MYBPC3-201ENST00000256993 4217 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 JAM2-201ENST00000312957 4209 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 MYBPC3-202ENST00000399249 4217 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 ZNF2-203ENST00000614034 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 AC023934.1-201ENST00000574529 2389 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 MFSD4A-201ENST00000367147 4095 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 Y_RNA.224-201ENST00000364308 111 ntBASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 KCNK16-201ENST00000373227 789 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 PAX4-203ENST00000378740 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP9-4Q9BYQ2 SNORA66-201ENST00000384792 133 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms