Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SPDYE3-201ENST00000332397 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CD22-203ENST00000419549 2642 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 OLA1P3-201ENST00000550756 2555 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 NF2-206ENST00000361676 1716 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CSPG4P12-201ENST00000558282 4853 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 WDR91-201ENST00000354475 4588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 MPP2-201ENST00000269095 4414 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 OR3A3-201ENST00000291231 966 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 LSM3-201ENST00000306024 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-633P-201ENST00000362612 103 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-674P-201ENST00000363831 107 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 FCER1G-202ENST00000367992 551 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 LCN1-202ENST00000371781 764 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AP002088.1-201ENST00000382740 395 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 MT-TC-201ENST00000387405 66 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AL121949.3-201ENST00000406684 385 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AL591479.1-201ENST00000417001 635 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 EIF4HP2-201ENST00000424380 563 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 RPL19P21-201ENST00000424919 591 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC007563.1-201ENST00000434973 689 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 HMGB1P37-201ENST00000439613 609 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 HIST1H2APS5-201ENST00000454320 369 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC004223.1-201ENST00000479840 271 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AL132838.2-201ENST00000492041 314 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AP003551.1-201ENST00000495884 574 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC233724.12-201ENST00000512227 594 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-795P-201ENST00000516323 103 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AF096876.1-201ENST00000565564 444 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC100827.1-201ENST00000569853 382 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SL525P-201ENST00000579267 280 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 WSB1-213ENST00000583193 552 ntTSL 4 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 SCGB2B3P-201ENST00000599388 409 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 PINLYP-207ENST00000612042 914 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC027139.2-201ENST00000615639 448 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AL354751.3-201ENST00000618526 1027 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ACSS1-205ENST00000537502 3509 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 EFHC1-214ENST00000636107 3530 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 PTER-203ENST00000423462 3212 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 YAF2-219ENST00000555248 5095 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ERCC3-201ENST00000285398 2750 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 C14orf159-217ENST00000520328 2687 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AC073073.2-201ENST00000609827 2578 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 MAPK10-255ENST00000641020 2412 ntBASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CASR-201ENST00000490131 4015 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CES5A-206ENST00000521992 2258 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 PDK4-201ENST00000005178 3576 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 SCARA3-201ENST00000301904 3510 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 NSUN4-209ENST00000537428 2087 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 AL360004.1-201ENST00000358748 3258 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP3-3Q9BYR6 ALDH1L1-210ENST00000472186 3157 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 NUTM1-204ENST00000614490 4196 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC125257.1-201ENST00000560400 2930 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms