RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
HMGB1P37-201ENST00000439613 CHIC1Q5VXU3 224 aa12.05□□□□□ -0.48
HMGB1P37-201ENST00000439613 PHF23Q9BUL5 403 aaPredicted RBP10.6□□□□□ -0.71
HMGB1P37-201ENST00000439613 SENP3Q9H4L4 574 aaPredicted RBP10.43□□□□□ -0.74
HMGB1P37-201ENST00000439613 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
HMGB1P37-201ENST00000439613 FOXD1Q16676 465 aa9.67□□□□□ -0.86
HMGB1P37-201ENST00000439613 ADRA2BP18089 450 aa9.35□□□□□ -0.91
HMGB1P37-201ENST00000439613 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
HMGB1P37-201ENST00000439613 PIAS4Q8N2W9 510 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P37-201ENST00000439613 NISCHQ9Y2I1 1504 aa8.91□□□□□ -0.98
HMGB1P37-201ENST00000439613 MSH5O43196 834 aa8.9□□□□□ -0.98
HMGB1P37-201ENST00000439613 PPP4R3CPQ6ZMV5 832 aa8.66□□□□□ -1.02
HMGB1P37-201ENST00000439613 SCAF1Q9H7N4 1312 aaKnown RBP8.57□□□□□ -1.04
HMGB1P37-201ENST00000439613 KCNA4P22459 653 aa8.49□□□□□ -1.05
HMGB1P37-201ENST00000439613 MAPK8IP2Q13387 824 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P37-201ENST00000439613 NCBP3Q53F19 620 aaKnown RBP8.46□□□□□ -1.06
HMGB1P37-201ENST00000439613 CNKSR2Q8WXI2 1034 aa8.41□□□□□ -1.06
HMGB1P37-201ENST00000439613 DMRT2Q9Y5R5 561 aa8.32□□□□□ -1.08
HMGB1P37-201ENST00000439613 NPM3O75607 178 aaKnown RBP8.31□□□□□ -1.08
HMGB1P37-201ENST00000439613 RNF216Q9NWF9 866 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P37-201ENST00000439613 HOXD11P31277 338 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P37-201ENST00000439613 SLC4A1APQ9BWU0 796 aaKnown RBP8.11□□□□□ -1.11
HMGB1P37-201ENST00000439613 DNAJC5BQ9UF47 199 aa8.06□□□□□ -1.12
HMGB1P37-201ENST00000439613 EHMT2Q96KQ7 1210 aa8.04□□□□□ -1.12
HMGB1P37-201ENST00000439613 POTEDQ86YR6 584 aa8.02□□□□□ -1.13
HMGB1P37-201ENST00000439613 DCAF8L1A6NGE4 600 aa7.98□□□□□ -1.13
HMGB1P37-201ENST00000439613 ZBTB22O15209 634 aa7.83□□□□□ -1.16
HMGB1P37-201ENST00000439613 SLC4A2P04920 1241 aa7.83□□□□□ -1.16
HMGB1P37-201ENST00000439613 CSRNP3Q8WYN3 585 aa7.83□□□□□ -1.16
HMGB1P37-201ENST00000439613 CCDC180Q9P1Z9 1646 aa7.82□□□□□ -1.16
HMGB1P37-201ENST00000439613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGB1P37-201ENST00000439613 FOXD4L1Q9NU39 408 aa7.8□□□□□ -1.16
HMGB1P37-201ENST00000439613 MYCNP04198 464 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P37-201ENST00000439613 U3KPZ7 1027 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P37-201ENST00000439613 RNF39Q9H2S5 420 aa7.62□□□□□ -1.19
HMGB1P37-201ENST00000439613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P37-201ENST00000439613 HNRNPUL2Q1KMD3 747 aaKnown RBP7.61□□□□□ -1.19
HMGB1P37-201ENST00000439613 SAMD1Q6SPF0 538 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P37-201ENST00000439613 ATXN8OSP0DMR3 200 aa7.55□□□□□ -1.2
HMGB1P37-201ENST00000439613 C1QBPQ07021 282 aaKnown RBP7.55□□□□□ -1.2
HMGB1P37-201ENST00000439613 APLP2Q06481 763 aa7.52□□□□□ -1.21
HMGB1P37-201ENST00000439613 ATF5Q9Y2D1 282 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P37-201ENST00000439613 ZCCHC6Q5VYS8 1495 aaKnown RBP7.47□□□□□ -1.21
HMGB1P37-201ENST00000439613 SPINK5Q9NQ38 1064 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P37-201ENST00000439613 CAPN15O75808 1086 aa7.42□□□□□ -1.22
HMGB1P37-201ENST00000439613 CACNB1Q02641 598 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P37-201ENST00000439613 DCAF1Q9Y4B6 1507 aa7.41□□□□□ -1.22
HMGB1P37-201ENST00000439613 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P37-201ENST00000439613 ZNF219Q9P2Y4 722 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P37-201ENST00000439613 DCAF8L2P0C7V8 631 aa7.35□□□□□ -1.23
HMGB1P37-201ENST00000439613 MYO15BQ96JP2 1530 aa7.33□□□□□ -1.24
HMGB1P37-201ENST00000439613 ABCC9O60706 1549 aa7.32□□□□□ -1.24
HMGB1P37-201ENST00000439613 POLA2Q14181 598 aa7.29□□□□□ -1.24
HMGB1P37-201ENST00000439613 DSG3P32926 999 aa7.28□□□□□ -1.24
HMGB1P37-201ENST00000439613 NACADO15069 1562 aa7.28□□□□□ -1.24
HMGB1P37-201ENST00000439613 ABCB7O75027 752 aa7.27□□□□□ -1.25
HMGB1P37-201ENST00000439613 RB1CC1Q8TDY2 1594 aa7.21□□□□□ -1.25
HMGB1P37-201ENST00000439613 SHROOM4Q9ULL8 1493 aa7.2□□□□□ -1.26
HMGB1P37-201ENST00000439613 FBLN2P98095 1184 aa7.17□□□□□ -1.26
HMGB1P37-201ENST00000439613 ZBTB12Q9Y330 459 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P37-201ENST00000439613 MKRN4PQ13434 485 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P37-201ENST00000439613 SCRIBQ14160 1630 aa7.12□□□□□ -1.27
HMGB1P37-201ENST00000439613 FKBP8Q14318 412 aa7.1□□□□□ -1.27
HMGB1P37-201ENST00000439613 UNC13AQ9UPW8 1703 aa7.04□□□□□ -1.28
HMGB1P37-201ENST00000439613 SPDYE4A6NLX3 237 aa7.02□□□□□ -1.29
HMGB1P37-201ENST00000439613 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
HMGB1P37-201ENST00000439613 SPDYE2BA6NHP3 402 aa6.98□□□□□ -1.29
HMGB1P37-201ENST00000439613 SPDYE6P0CI01 402 aa6.98□□□□□ -1.29
HMGB1P37-201ENST00000439613 SPDYE2Q495Y8 402 aa6.98□□□□□ -1.29
HMGB1P37-201ENST00000439613 ZNF692Q9BU19 519 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P37-201ENST00000439613 SUPT5HO00267 1087 aaKnown RBP6.96□□□□□ -1.3
HMGB1P37-201ENST00000439613 BICRAQ9NZM4 1560 aa6.95□□□□□ -1.3
HMGB1P37-201ENST00000439613 RBM42Q9BTD8 480 aaKnown RBP6.94□□□□□ -1.3
HMGB1P37-201ENST00000439613 SSUH2Q9Y2M2 353 aa6.91□□□□□ -1.3
HMGB1P37-201ENST00000439613 PABPN1Q86U42 306 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P37-201ENST00000439613 RSF1Q96T23 1441 aaPredicted RBP6.9□□□□□ -1.31
HMGB1P37-201ENST00000439613 BAZ1AQ9NRL2 1556 aaPredicted RBP6.9□□□□□ -1.31
HMGB1P37-201ENST00000439613 PROM2Q8N271 834 aa6.89□□□□□ -1.31
HMGB1P37-201ENST00000439613 CECR2Q9BXF3 1484 aa6.88□□□□□ -1.31
HMGB1P37-201ENST00000439613 AKT1S1Q96B36 256 aa6.87□□□□□ -1.31
HMGB1P37-201ENST00000439613 MROH2BQ7Z745 1585 aa6.86□□□□□ -1.31
HMGB1P37-201ENST00000439613 SMARCA4P51532 1647 aa6.85□□□□□ -1.31
HMGB1P37-201ENST00000439613 FBXO3Q9UK99 471 aa6.82□□□□□ -1.32
HMGB1P37-201ENST00000439613 WIZO95785 1651 aa6.81□□□□□ -1.32
HMGB1P37-201ENST00000439613 REM2Q8IYK8 340 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P37-201ENST00000439613 STAG3Q9UJ98 1225 aa6.79□□□□□ -1.32
HMGB1P37-201ENST00000439613 PEG3Q9GZU2 1588 aa6.78□□□□□ -1.32
HMGB1P37-201ENST00000439613 SPDYE1Q8NFV5 336 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P37-201ENST00000439613 SMARCA2P51531 1590 aa6.77□□□□□ -1.33
HMGB1P37-201ENST00000439613 TOP2AP11388 1531 aaKnown RBP6.76□□□□□ -1.33
HMGB1P37-201ENST00000439613 EIF4G1Q04637 1599 aaKnown RBP6.75□□□□□ -1.33
HMGB1P37-201ENST00000439613 CLEC11AQ9Y240 323 aa6.74□□□□□ -1.33
HMGB1P37-201ENST00000439613 ATAD2BQ9ULI0 1458 aa6.73□□□□□ -1.33
HMGB1P37-201ENST00000439613 BAZ1BQ9UIG0 1483 aaKnown RBP6.72□□□□□ -1.33
HMGB1P37-201ENST00000439613 PITPNM1O00562 1244 aa6.71□□□□□ -1.34
HMGB1P37-201ENST00000439613 NCAPD3P42695 1498 aa6.71□□□□□ -1.34
HMGB1P37-201ENST00000439613 PRR29P0C7W0 189 aa6.7□□□□□ -1.34
HMGB1P37-201ENST00000439613 HMGXB3Q12766 1538 aa6.7□□□□□ -1.34
HMGB1P37-201ENST00000439613 VASPP50552 380 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P37-201ENST00000439613 MIER1Q8N108 512 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms