Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 AC010980.2-201ENST00000587099 1412 ntBASIC20.7■□□□□ 0.9
CAPN6Q9Y6Q1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AC009113.1-201ENST00000570267 2443 ntBASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AC116351.2-201ENST00000606540 1585 ntBASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AC069236.1-201ENST00000604339 616 ntBASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AC087623.3-201ENST00000607047 1098 ntBASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 AL589743.5-201ENST00000616611 1050 ntBASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CAPN6Q9Y6Q1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 KRT18P5-201ENST00000436075 1291 ntBASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN6Q9Y6Q1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CAPN6Q9Y6Q1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms