Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 AL390719.1-204ENST00000412397 1219 ntBASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 Z82202.1-201ENST00000623446 1880 ntBASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB3Q9Y5G1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 AC004408.2-201ENST00000623613 2777 ntBASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 AP001271.2-201ENST00000624018 1556 ntBASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB3Q9Y5G1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 AC009237.14-201ENST00000609975 1594 ntBASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 HLA-B-256ENST00000639848 1089 ntBASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGB3Q9Y5G1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB3Q9Y5G1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms