Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 AC124016.1-201ENST00000609552 612 ntBASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BLOC1S4Q9NUP1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BLOC1S4Q9NUP1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 KRASP1-201ENST00000407852 552 ntBASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 TUBB8P6-201ENST00000436895 1288 ntBASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BLOC1S4Q9NUP1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 AC133681.1-201ENST00000465482 601 ntBASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BLOC1S4Q9NUP1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 AC239809.2-201ENST00000415381 517 ntBASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 ITM2C-210ENST00000620962 501 ntBASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 ZNF815P-204ENST00000434898 1737 ntBASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BLOC1S4Q9NUP1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BLOC1S4Q9NUP1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms