Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 AC023632.3-201ENST00000521633 145 ntBASIC18.37■□□□□ 0.53
KLHL1Q9NR64 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 MIR4497-201ENST00000583208 89 ntBASIC18.37■□□□□ 0.53
KLHL1Q9NR64 AC110285.5-201ENST00000611501 352 ntBASIC18.37■□□□□ 0.53
KLHL1Q9NR64 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KLHL1Q9NR64 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 AL162377.1-201ENST00000618844 1793 ntBASIC18.35■□□□□ 0.53
KLHL1Q9NR64 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 AC133681.1-201ENST00000465482 601 ntBASIC18.35■□□□□ 0.53
KLHL1Q9NR64 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KLHL1Q9NR64 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 RPS2P55-201ENST00000397318 883 ntBASIC18.34■□□□□ 0.53
KLHL1Q9NR64 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 AC107956.1-201ENST00000494359 873 ntBASIC18.34■□□□□ 0.53
KLHL1Q9NR64 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KLHL1Q9NR64 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 AC099778.1-201ENST00000568593 1911 ntBASIC18.33■□□□□ 0.53
KLHL1Q9NR64 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
KLHL1Q9NR64 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms