Protein–RNA interactions for Protein: Q9NQ75

CASS4, Cas scaffolding protein family member 4, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4Q9NQ75 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CASS4Q9NQ75 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASS4Q9NQ75 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASS4Q9NQ75 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
CASS4Q9NQ75 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.82■□□□□ 0.76
CASS4Q9NQ75 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 AC142086.2-201ENST00000569753 217 ntBASIC19.81■□□□□ 0.76
CASS4Q9NQ75 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASS4Q9NQ75 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
CASS4Q9NQ75 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 AC069152.1-201ENST00000438030 544 ntBASIC19.8■□□□□ 0.76
CASS4Q9NQ75 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 AC133041.1-202ENST00000642053 222 ntBASIC19.8■□□□□ 0.76
CASS4Q9NQ75 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASS4Q9NQ75 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 AL032819.2-201ENST00000624543 2162 ntBASIC19.79■□□□□ 0.76
CASS4Q9NQ75 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASS4Q9NQ75 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 AC018445.3-201ENST00000624177 1945 ntBASIC19.78■□□□□ 0.76
CASS4Q9NQ75 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
CASS4Q9NQ75 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASS4Q9NQ75 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASS4Q9NQ75 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASS4Q9NQ75 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASS4Q9NQ75 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASS4Q9NQ75 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms