Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNCQ9H7C4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 CD99P1-205ENST00000527459 561 ntBASIC20.8■□□□□ 0.92
SYNCQ9H7C4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 TFP1-202ENST00000475455 1573 ntBASIC20.8■□□□□ 0.92
SYNCQ9H7C4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNCQ9H7C4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 POM121L13P-201ENST00000422362 380 ntBASIC20.79■□□□□ 0.92
SYNCQ9H7C4 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCQ9H7C4 AL158211.5-201ENST00000623583 2518 ntBASIC20.78■□□□□ 0.92
SYNCQ9H7C4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 AC026366.1-201ENST00000488803 879 ntBASIC20.78■□□□□ 0.92
SYNCQ9H7C4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNCQ9H7C4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 KRT17P3-201ENST00000420566 1262 ntBASIC20.77■□□□□ 0.92
SYNCQ9H7C4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNCQ9H7C4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNCQ9H7C4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNCQ9H7C4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNCQ9H7C4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNCQ9H7C4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SYNCQ9H7C4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNCQ9H7C4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms