Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 KRT19P1-201ENST00000405746 1186 ntBASIC19.04■□□□□ 0.64
EBF4Q9BQW3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 AC141586.3-201ENST00000562166 1838 ntBASIC19.04■□□□□ 0.64
EBF4Q9BQW3 AL390961.4-201ENST00000623958 2535 ntBASIC19.04■□□□□ 0.64
EBF4Q9BQW3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EBF4Q9BQW3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 AC010536.3-201ENST00000620306 533 ntBASIC19.03■□□□□ 0.64
EBF4Q9BQW3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EBF4Q9BQW3 AC135050.7-201ENST00000624508 2218 ntBASIC19.02■□□□□ 0.64
EBF4Q9BQW3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 AC020763.4-201ENST00000623414 4170 ntBASIC19.02■□□□□ 0.64
EBF4Q9BQW3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
EBF4Q9BQW3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.02■□□□□ 0.63
EBF4Q9BQW3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 AL133373.2-201ENST00000623187 2828 ntBASIC19.01■□□□□ 0.63
EBF4Q9BQW3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 WIZP1-201ENST00000531444 2299 ntBASIC19.01■□□□□ 0.63
EBF4Q9BQW3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 HLA-G-202ENST00000376815 851 ntBASIC19.01■□□□□ 0.63
EBF4Q9BQW3 HLA-G-203ENST00000376818 1127 ntBASIC19.01■□□□□ 0.63
EBF4Q9BQW3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 AC105020.6-201ENST00000621523 1217 ntBASIC19.01■□□□□ 0.63
EBF4Q9BQW3 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms