Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 IER3-202ENST00000376377 1350 ntBASIC19.12■□□□□ 0.65
PCDH15Q96QU1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 KRT16P6-202ENST00000425692 1426 ntBASIC19.12■□□□□ 0.65
PCDH15Q96QU1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH15Q96QU1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 AL450487.1-201ENST00000426799 995 ntBASIC19.11■□□□□ 0.65
PCDH15Q96QU1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 TMEM179-206ENST00000616017 1645 ntBASIC19.11■□□□□ 0.65
PCDH15Q96QU1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH15Q96QU1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 TPM4P1-201ENST00000436100 807 ntBASIC19.1■□□□□ 0.65
PCDH15Q96QU1 CA15P1-201ENST00000481698 905 ntBASIC19.1■□□□□ 0.65
PCDH15Q96QU1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 KRT18P38-201ENST00000449496 1282 ntBASIC19.1■□□□□ 0.65
PCDH15Q96QU1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 AC079834.2-201ENST00000609776 1949 ntBASIC19.1■□□□□ 0.65
PCDH15Q96QU1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH15Q96QU1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 SMG8-203ENST00000578922 2178 ntBASIC19.09■□□□□ 0.65
PCDH15Q96QU1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 KRT8P8-201ENST00000434750 1448 ntBASIC19.09■□□□□ 0.65
PCDH15Q96QU1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 AL353719.1-201ENST00000566847 864 ntBASIC19.09■□□□□ 0.65
PCDH15Q96QU1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.09■□□□□ 0.65
PCDH15Q96QU1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH15Q96QU1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 AL137060.1-201ENST00000618151 2648 ntBASIC19.08■□□□□ 0.65
PCDH15Q96QU1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH15Q96QU1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH15Q96QU1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH15Q96QU1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms