Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 BICD1-207ENST00000551848 1962 ntBASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 WIZP1-201ENST00000531444 2299 ntBASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP6Q96FZ7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CHMP6Q96FZ7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP6Q96FZ7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CHMP6Q96FZ7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CHMP6Q96FZ7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CHMP6Q96FZ7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 AL354751.1-201ENST00000412768 1863 ntBASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP6Q96FZ7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP6Q96FZ7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP6Q96FZ7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms