Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 UNC93B5-201ENST00000530315 699 ntBASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 AP006587.1-201ENST00000534129 1502 ntBASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHBDF1Q96CC6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RHBDF1Q96CC6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 AL032819.2-201ENST00000624543 2162 ntBASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RHBDF1Q96CC6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 YBX1P10-201ENST00000444752 975 ntBASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 AC018445.3-201ENST00000624177 1945 ntBASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHBDF1Q96CC6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RHBDF1Q96CC6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19■□□□□ 0.63
RHBDF1Q96CC6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 BX323043.1-201ENST00000641006 1765 ntBASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RHBDF1Q96CC6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms