Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RNF25Q96BH1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF25Q96BH1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 AP001002.2-201ENST00000625137 386 ntBASIC20.5■□□□□ 0.87
RNF25Q96BH1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF25Q96BH1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF25Q96BH1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF25Q96BH1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF25Q96BH1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 GUSBP6-202ENST00000438529 1198 ntBASIC20.48■□□□□ 0.87
RNF25Q96BH1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF25Q96BH1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF25Q96BH1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF25Q96BH1 Z82202.1-201ENST00000623446 1880 ntBASIC20.47■□□□□ 0.87
RNF25Q96BH1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF25Q96BH1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF25Q96BH1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF25Q96BH1 AC116351.2-201ENST00000606540 1585 ntBASIC20.47■□□□□ 0.87
RNF25Q96BH1 AC120498.9-201ENST00000339021 3867 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms