Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PTP4A1Q93096 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PTP4A1Q93096 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.54■□□□□ 0.4
PTP4A1Q93096 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 MIR663A-201ENST00000385250 93 ntBASIC17.54■□□□□ 0.4
PTP4A1Q93096 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.54■□□□□ 0.4
PTP4A1Q93096 AC105036.2-201ENST00000569468 176 ntBASIC17.54■□□□□ 0.4
PTP4A1Q93096 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 AC018553.1-201ENST00000616682 1458 ntBASIC17.54■□□□□ 0.4
PTP4A1Q93096 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.54■□□□□ 0.4
PTP4A1Q93096 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTP4A1Q93096 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTP4A1Q93096 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PTP4A1Q93096 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 AC093787.1-201ENST00000450396 207 ntBASIC17.53■□□□□ 0.4
PTP4A1Q93096 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.53■□□□□ 0.4
PTP4A1Q93096 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 AL121832.2-201ENST00000610979 668 ntBASIC17.53■□□□□ 0.4
PTP4A1Q93096 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTP4A1Q93096 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.53■□□□□ 0.4
PTP4A1Q93096 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 AC083906.2-201ENST00000511578 360 ntBASIC17.52■□□□□ 0.4
PTP4A1Q93096 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.52■□□□□ 0.4
PTP4A1Q93096 AL050303.2-201ENST00000619798 666 ntBASIC17.52■□□□□ 0.4
PTP4A1Q93096 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTP4A1Q93096 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
PTP4A1Q93096 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.52■□□□□ 0.39
PTP4A1Q93096 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PTP4A1Q93096 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.52■□□□□ 0.39
PTP4A1Q93096 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTP4A1Q93096 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.51■□□□□ 0.39
PTP4A1Q93096 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTP4A1Q93096 AC116351.2-201ENST00000606540 1585 ntBASIC17.51■□□□□ 0.39
PTP4A1Q93096 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms