Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 AC091799.1-201ENST00000422823 811 ntBASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 RARRES2P4-201ENST00000514074 484 ntBASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40AQ8WXH6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.14■□□□□ 0.34
RAB40AQ8WXH6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB40AQ8WXH6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 AL138781.1-201ENST00000566567 1274 ntBASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 MIR4758-201ENST00000577688 71 ntBASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 AC133041.1-202ENST00000642053 222 ntBASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40AQ8WXH6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 AC093787.1-201ENST00000450396 207 ntBASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB40AQ8WXH6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 LETM1P2-201ENST00000597330 2178 ntBASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MIPEPP3-201ENST00000412105 444 ntBASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 AC073210.2-201ENST00000430369 194 ntBASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms