Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 LINC01465-201ENST00000408887 1940 ntBASIC16.88■□□□□ 0.29
CCDC107Q8WV48 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC107Q8WV48 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 AC016769.1-201ENST00000409132 1010 ntBASIC16.87■□□□□ 0.29
CCDC107Q8WV48 KRT18P5-201ENST00000436075 1291 ntBASIC16.87■□□□□ 0.29
CCDC107Q8WV48 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC107Q8WV48 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.86■□□□□ 0.29
CCDC107Q8WV48 KRT18P11-201ENST00000435214 1283 ntBASIC16.86■□□□□ 0.29
CCDC107Q8WV48 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.86■□□□□ 0.29
CCDC107Q8WV48 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC107Q8WV48 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms