Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 AC093525.10-201ENST00000625130 1569 ntBASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 IKBKGP1-201ENST00000612193 1073 ntBASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4Y2Q8TD47 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 AL355472.2-201ENST00000422958 438 ntBASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4Y2Q8TD47 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 AL031598.1-201ENST00000561511 1773 ntBASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.08■□□□□ 0.33
RPS4Y2Q8TD47 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 AL589743.5-201ENST00000616611 1050 ntBASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4Y2Q8TD47 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms