Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC006128.1-201ENST00000624704 1661 ntBASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDND2Q8NHS1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 BX323043.1-201ENST00000641006 1765 ntBASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 KRT16P5-201ENST00000455284 522 ntBASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 MIR4785-201ENST00000585005 73 ntBASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDND2Q8NHS1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 HTR7P1-201ENST00000538670 1336 ntBASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDND2Q8NHS1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 REXO1L12P-201ENST00000622156 912 ntBASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 KRT8P17-201ENST00000453110 1448 ntBASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms