Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRFBP1Q8NEF9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 POU5F1P3-201ENST00000428824 1078 ntBASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SRFBP1Q8NEF9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
SRFBP1Q8NEF9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SRFBP1Q8NEF9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 AC125437.2-201ENST00000625180 2167 ntBASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 MTDHP1-201ENST00000605323 784 ntBASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SRFBP1Q8NEF9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 TREX1-205ENST00000625293 1783 ntBASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 FAM201B-201ENST00000458407 597 ntBASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 AC004264.1-201ENST00000608354 794 ntBASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRFBP1Q8NEF9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 TUBB8P6-201ENST00000436895 1288 ntBASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 AC006058.3-201ENST00000606217 1069 ntBASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRFBP1Q8NEF9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms