Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 KRT8P36-201ENST00000489121 1440 ntBASIC18.93■□□□□ 0.62
HIPK4Q8NE63 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK4Q8NE63 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.92■□□□□ 0.62
HIPK4Q8NE63 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 MIR638-201ENST00000385237 100 ntBASIC18.91■□□□□ 0.62
HIPK4Q8NE63 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 KRT18P14-201ENST00000534205 1250 ntBASIC18.91■□□□□ 0.62
HIPK4Q8NE63 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 FAM21FP-204ENST00000608637 956 ntBASIC18.91■□□□□ 0.62
HIPK4Q8NE63 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 AC004854.2-201ENST00000608450 1441 ntBASIC18.91■□□□□ 0.62
HIPK4Q8NE63 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIPK4Q8NE63 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.9■□□□□ 0.62
HIPK4Q8NE63 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms