Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 RPPH1-201ENST00000516869 333 ntBASIC18.41■□□□□ 0.54
PSD4Q8NDX1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PSD4Q8NDX1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 FAM197Y4-202ENST00000622692 608 ntBASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.4■□□□□ 0.54
PSD4Q8NDX1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PSD4Q8NDX1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PSD4Q8NDX1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PSD4Q8NDX1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PSD4Q8NDX1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PSD4Q8NDX1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 UBE2SP1-201ENST00000450587 669 ntBASIC18.38■□□□□ 0.53
PSD4Q8NDX1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PSD4Q8NDX1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms