Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 CRYGFP-201ENST00000418459 633 ntBASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF248Q8NDW4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 AC121338.2-201ENST00000622535 1744 ntBASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 HMGA1P5-201ENST00000412453 271 ntBASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 C1QL1P1-201ENST00000568105 661 ntBASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 AL121894.2-201ENST00000602977 491 ntBASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 FAM87A-204ENST00000613235 858 ntBASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 MIR2861-201ENST00000636310 90 ntBASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
ZNF248Q8NDW4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 RNF152P1-201ENST00000397754 604 ntBASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 AC117947.1-201ENST00000427448 529 ntBASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 KRT18P48-201ENST00000434763 852 ntBASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 AP000550.4-202ENST00000639755 178 ntBASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 MYC-208ENST00000641036 567 ntBASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF248Q8NDW4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF248Q8NDW4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ZNF248Q8NDW4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF248Q8NDW4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 AL031133.1-201ENST00000406807 723 ntBASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 AC009947.2-201ENST00000444014 672 ntBASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF248Q8NDW4 KRT8P20-201ENST00000423953 1409 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms