Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 AC016405.3-201ENST00000607710 860 ntBASIC16.19■□□□□ 0.18
COMMD1Q8N668 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.19■□□□□ 0.18
COMMD1Q8N668 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COMMD1Q8N668 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 AC007322.3-201ENST00000426526 701 ntBASIC16.18■□□□□ 0.18
COMMD1Q8N668 AC069152.1-201ENST00000438030 544 ntBASIC16.18■□□□□ 0.18
COMMD1Q8N668 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD1Q8N668 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD1Q8N668 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 AC092118.2-201ENST00000613495 667 ntBASIC16.17■□□□□ 0.18
COMMD1Q8N668 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COMMD1Q8N668 AC010980.2-201ENST00000587099 1412 ntBASIC16.17■□□□□ 0.18
COMMD1Q8N668 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD1Q8N668 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 MIPEPP3-201ENST00000412105 444 ntBASIC16.16■□□□□ 0.18
COMMD1Q8N668 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COMMD1Q8N668 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD1Q8N668 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms