Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CHPFQ8IZ52 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHPFQ8IZ52 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHPFQ8IZ52 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHPFQ8IZ52 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 AC005521.1-201ENST00000393351 872 ntBASIC19.9■□□□□ 0.78
CHPFQ8IZ52 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.9■□□□□ 0.78
CHPFQ8IZ52 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.78
CHPFQ8IZ52 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHPFQ8IZ52 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CHPFQ8IZ52 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 MESTP1-201ENST00000404287 994 ntBASIC19.89■□□□□ 0.77
CHPFQ8IZ52 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AC113347.1-201ENST00000413321 391 ntBASIC19.89■□□□□ 0.77
CHPFQ8IZ52 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AC004980.1-204ENST00000429707 299 ntBASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 B3GAT3P1-201ENST00000471720 806 ntBASIC19.89■□□□□ 0.77
CHPFQ8IZ52 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CHPFQ8IZ52 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 DGCR10-201ENST00000609839 495 ntBASIC19.88■□□□□ 0.77
CHPFQ8IZ52 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHPFQ8IZ52 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 AL137013.1-201ENST00000432946 1228 ntBASIC19.87■□□□□ 0.77
CHPFQ8IZ52 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 AC011506.1-201ENST00000474329 610 ntBASIC19.87■□□□□ 0.77
CHPFQ8IZ52 AL049597.2-201ENST00000565575 961 ntBASIC19.87■□□□□ 0.77
CHPFQ8IZ52 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms