Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VRK2Q86Y07 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK2Q86Y07 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
VRK2Q86Y07 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 AC083880.1-201ENST00000608266 535 ntBASIC18.06■□□□□ 0.48
VRK2Q86Y07 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK2Q86Y07 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK2Q86Y07 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 HLA-B-256ENST00000639848 1089 ntBASIC18.05■□□□□ 0.48
VRK2Q86Y07 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.05■□□□□ 0.48
VRK2Q86Y07 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK2Q86Y07 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.04■□□□□ 0.48
VRK2Q86Y07 PNMA6B-201ENST00000538162 1200 ntBASIC18.04■□□□□ 0.48
VRK2Q86Y07 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK2Q86Y07 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK2Q86Y07 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK2Q86Y07 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.03■□□□□ 0.48
VRK2Q86Y07 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms