Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC25Q86WR0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.15■□□□□ 0.82
CCDC25Q86WR0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC25Q86WR0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC25Q86WR0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CCDC25Q86WR0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC25Q86WR0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC25Q86WR0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC25Q86WR0 HTR7P1-202ENST00000624664 4411 ntBASIC20.13■□□□□ 0.81
CCDC25Q86WR0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC25Q86WR0 PHGDH-210ENST00000641115 1638 ntBASIC20.13■□□□□ 0.81
CCDC25Q86WR0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.12■□□□□ 0.81
CCDC25Q86WR0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC25Q86WR0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCDC25Q86WR0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC25Q86WR0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC25Q86WR0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms