Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRRTM4Q86VH4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
LRRTM4Q86VH4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 KSR1P1-201ENST00000446298 240 ntBASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 CD177P1-201ENST00000606252 935 ntBASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 SLC25A24-204ENST00000569674 2357 ntBASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM4Q86VH4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 FAM197Y1-201ENST00000421178 764 ntBASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRTM4Q86VH4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 TSPY7P-201ENST00000431358 1114 ntBASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM4Q86VH4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 KRT16P1-201ENST00000399124 1418 ntBASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 MIR4785-201ENST00000585005 73 ntBASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRTM4Q86VH4 AL445675.2-201ENST00000620291 557 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms