Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.74■□□□□ 0.75
PACS1Q6VY07 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 AC092368.3-202ENST00000574180 1591 ntBASIC19.74■□□□□ 0.75
PACS1Q6VY07 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS1Q6VY07 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 AL390719.1-204ENST00000412397 1219 ntBASIC19.73■□□□□ 0.75
PACS1Q6VY07 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS1Q6VY07 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
PACS1Q6VY07 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 PNMA6B-201ENST00000538162 1200 ntBASIC19.72■□□□□ 0.75
PACS1Q6VY07 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS1Q6VY07 AC004408.2-201ENST00000623613 2777 ntBASIC19.72■□□□□ 0.75
PACS1Q6VY07 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.72■□□□□ 0.75
PACS1Q6VY07 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PACS1Q6VY07 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PACS1Q6VY07 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PACS1Q6VY07 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.7■□□□□ 0.74
PACS1Q6VY07 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.7■□□□□ 0.74
PACS1Q6VY07 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms