Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KRT16P6-202ENST00000425692 1426 ntBASIC17.78■□□□□ 0.44
NIPAL3Q6P499 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NIPAL3Q6P499 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.77■□□□□ 0.44
NIPAL3Q6P499 AC092368.3-202ENST00000574180 1591 ntBASIC17.77■□□□□ 0.44
NIPAL3Q6P499 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NIPAL3Q6P499 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 AP001271.2-201ENST00000624018 1556 ntBASIC17.76■□□□□ 0.43
NIPAL3Q6P499 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 AC060766.5-201ENST00000590539 871 ntBASIC17.76■□□□□ 0.43
NIPAL3Q6P499 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 HLA-B-256ENST00000639848 1089 ntBASIC17.76■□□□□ 0.43
NIPAL3Q6P499 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NIPAL3Q6P499 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
NIPAL3Q6P499 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NIPAL3Q6P499 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms