Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 TMEM179-206ENST00000616017 1645 ntBASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 AC113347.1-201ENST00000413321 391 ntBASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.61■□□□□ 0.25
ARFGEF3Q5TH69 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 AC145285.6-201ENST00000604632 637 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 GABARAPL3-202ENST00000624044 1851 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 FAM210CP-201ENST00000445714 574 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 FITM1-202ENST00000559294 800 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 AP000525.1-201ENST00000608286 694 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 AC010947.1-201ENST00000623454 693 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 FSCN1P1-201ENST00000568912 1481 ntBASIC16.6■□□□□ 0.25
ARFGEF3Q5TH69 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 MESTP1-201ENST00000404287 994 ntBASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 B3GAT3P1-201ENST00000471720 806 ntBASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ARFGEF3Q5TH69 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARFGEF3Q5TH69 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
ARFGEF3Q5TH69 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.58■□□□□ 0.25
ARFGEF3Q5TH69 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ARFGEF3Q5TH69 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ARFGEF3Q5TH69 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms