Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP6AP1LQ52LC2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 MIR935-201ENST00000401179 91 ntBASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 AL162430.1-201ENST00000480705 870 ntBASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 MIR5787-201ENST00000611784 55 ntBASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP6AP1LQ52LC2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 AC020763.4-201ENST00000623414 4170 ntBASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP6AP1LQ52LC2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 AC116351.2-201ENST00000606540 1585 ntBASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 GPX1P1-201ENST00000388829 606 ntBASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP6AP1LQ52LC2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms