Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H1AQ02539 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 NEFHP1-201ENST00000412845 2629 ntBASIC14.93□□□□□ -0.02
HIST1H1AQ02539 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H1AQ02539 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 AL355472.2-201ENST00000422958 438 ntBASIC14.92□□□□□ -0.02
HIST1H1AQ02539 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 CYP2T3P-201ENST00000601990 817 ntBASIC14.92□□□□□ -0.02
HIST1H1AQ02539 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.92□□□□□ -0.02
HIST1H1AQ02539 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1AQ02539 KRT16P6-202ENST00000425692 1426 ntBASIC14.92□□□□□ -0.02
HIST1H1AQ02539 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 AL589743.5-201ENST00000616611 1050 ntBASIC14.91□□□□□ -0.02
HIST1H1AQ02539 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 KRT8P17-201ENST00000453110 1448 ntBASIC14.91□□□□□ -0.02
HIST1H1AQ02539 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms