Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.11■□□□□ 0.17
SRPXP78539 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.11■□□□□ 0.17
SRPXP78539 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.11■□□□□ 0.17
SRPXP78539 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.11■□□□□ 0.17
SRPXP78539 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SRPXP78539 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.11■□□□□ 0.17
SRPXP78539 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SRPXP78539 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.11■□□□□ 0.17
SRPXP78539 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SRPXP78539 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SRPXP78539 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPXP78539 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SRPXP78539 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.1■□□□□ 0.17
SRPXP78539 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 HTR7P1-202ENST00000624664 4411 ntBASIC16.1■□□□□ 0.17
SRPXP78539 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SRPXP78539 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.1■□□□□ 0.17
SRPXP78539 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.1■□□□□ 0.17
SRPXP78539 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SRPXP78539 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.1■□□□□ 0.17
SRPXP78539 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SRPXP78539 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPXP78539 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPXP78539 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SRPXP78539 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 LETM1P2-201ENST00000597330 2178 ntBASIC16.09■□□□□ 0.17
SRPXP78539 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.09■□□□□ 0.17
SRPXP78539 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SRPXP78539 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPXP78539 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRPXP78539 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SRPXP78539 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SRPXP78539 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRPXP78539 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SRPXP78539 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SRPXP78539 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRPXP78539 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRPXP78539 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms