Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 HLA-B-256ENST00000639848 1089 ntBASIC17.65■□□□□ 0.42
RPS4XP62701 AC073648.6-201ENST00000641589 218 ntBASIC17.65■□□□□ 0.42
RPS4XP62701 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RPS4XP62701 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS4XP62701 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPS4XP62701 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPS4XP62701 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
RPS4XP62701 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPS4XP62701 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RPS4XP62701 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS4XP62701 AC098818.2-201ENST00000564925 2320 ntBASIC17.64■□□□□ 0.41
RPS4XP62701 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RPS4XP62701 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS4XP62701 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS4XP62701 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS4XP62701 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS4XP62701 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS4XP62701 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS4XP62701 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 AC087289.5-201ENST00000586076 3175 ntBASIC17.64■□□□□ 0.41
RPS4XP62701 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS4XP62701 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPS4XP62701 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.63■□□□□ 0.41
RPS4XP62701 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPS4XP62701 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPS4XP62701 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 UNC93B4-201ENST00000505679 747 ntBASIC17.63■□□□□ 0.41
RPS4XP62701 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RPS4XP62701 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RPS4XP62701 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.63■□□□□ 0.41
RPS4XP62701 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
RPS4XP62701 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS4XP62701 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RPS4XP62701 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RPS4XP62701 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
RPS4XP62701 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4XP62701 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 RPS2P4-201ENST00000476944 856 ntBASIC17.62■□□□□ 0.41
RPS4XP62701 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPS4XP62701 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 AP000974.1-201ENST00000623909 2387 ntBASIC17.62■□□□□ 0.41
RPS4XP62701 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4XP62701 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4XP62701 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RPS4XP62701 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4XP62701 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RPS4XP62701 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.62■□□□□ 0.41
RPS4XP62701 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPS4XP62701 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.62■□□□□ 0.41
RPS4XP62701 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.61■□□□□ 0.41
RPS4XP62701 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RPS4XP62701 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.61■□□□□ 0.41
RPS4XP62701 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.61■□□□□ 0.41
RPS4XP62701 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.61■□□□□ 0.41
RPS4XP62701 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPS4XP62701 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms