Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.05■□□□□ 0.48
PER3P56645 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PER3P56645 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.05■□□□□ 0.48
PER3P56645 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.05■□□□□ 0.48
PER3P56645 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.05■□□□□ 0.48
PER3P56645 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PER3P56645 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.05■□□□□ 0.48
PER3P56645 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.04■□□□□ 0.48
PER3P56645 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 LETM1P2-201ENST00000597330 2178 ntBASIC18.04■□□□□ 0.48
PER3P56645 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PER3P56645 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PER3P56645 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PER3P56645 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.04■□□□□ 0.48
PER3P56645 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
PER3P56645 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.04■□□□□ 0.48
PER3P56645 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.04■□□□□ 0.48
PER3P56645 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.04■□□□□ 0.48
PER3P56645 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PER3P56645 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.03■□□□□ 0.48
PER3P56645 AC121338.2-201ENST00000622535 1744 ntBASIC18.03■□□□□ 0.48
PER3P56645 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PER3P56645 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PER3P56645 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PER3P56645 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 KRT16P5-201ENST00000455284 522 ntBASIC18.03■□□□□ 0.48
PER3P56645 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.03■□□□□ 0.48
PER3P56645 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.03■□□□□ 0.48
PER3P56645 AF186192.3-201ENST00000583427 947 ntBASIC18.03■□□□□ 0.48
PER3P56645 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.03■□□□□ 0.48
PER3P56645 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 AL049796.1-201ENST00000565336 1766 ntBASIC18.03■□□□□ 0.48
PER3P56645 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.03■□□□□ 0.48
PER3P56645 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PER3P56645 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.02■□□□□ 0.48
PER3P56645 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PER3P56645 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PER3P56645 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.02■□□□□ 0.48
PER3P56645 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PER3P56645 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
PER3P56645 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.02■□□□□ 0.48
PER3P56645 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.02■□□□□ 0.48
PER3P56645 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms