Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB5CP51148 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB5CP51148 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB5CP51148 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB5CP51148 Z98044.1-201ENST00000632503 1764 ntBASIC15.72■□□□□ 0.11
RAB5CP51148 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RAB5CP51148 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB5CP51148 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB5CP51148 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB5CP51148 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB5CP51148 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 AC012313.1-201ENST00000593393 3059 ntBASIC15.71■□□□□ 0.11
RAB5CP51148 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB5CP51148 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
RAB5CP51148 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 TSPY13P-201ENST00000338964 914 ntBASIC15.71■□□□□ 0.11
RAB5CP51148 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.11
RAB5CP51148 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB5CP51148 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAB5CP51148 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
RAB5CP51148 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB5CP51148 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB5CP51148 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB5CP51148 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB5CP51148 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB5CP51148 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB5CP51148 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB5CP51148 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB5CP51148 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB5CP51148 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RAB5CP51148 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB5CP51148 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RAB5CP51148 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB5CP51148 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB5CP51148 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB5CP51148 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB5CP51148 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 AL161938.1-201ENST00000569833 2180 ntBASIC15.7■□□□□ 0.1
RAB5CP51148 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB5CP51148 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAB5CP51148 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB5CP51148 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB5CP51148 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 AC011270.2-201ENST00000624293 2550 ntBASIC15.7■□□□□ 0.1
RAB5CP51148 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB5CP51148 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB5CP51148 AL031598.1-201ENST00000561511 1773 ntBASIC15.7■□□□□ 0.1
RAB5CP51148 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB5CP51148 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB5CP51148 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB5CP51148 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB5CP51148 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB5CP51148 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 AC245052.3-201ENST00000450182 901 ntBASIC15.69■□□□□ 0.1
RAB5CP51148 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB5CP51148 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB5CP51148 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 AC093525.10-201ENST00000625130 1569 ntBASIC15.69■□□□□ 0.1
RAB5CP51148 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB5CP51148 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB5CP51148 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB5CP51148 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms