Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.31■□□□□ 0.36
SRP9P49458 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SRP9P49458 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRP9P49458 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SRP9P49458 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.3■□□□□ 0.36
SRP9P49458 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 AL049812.1-201ENST00000432563 2267 ntBASIC17.3■□□□□ 0.36
SRP9P49458 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SRP9P49458 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.3■□□□□ 0.36
SRP9P49458 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRP9P49458 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SRP9P49458 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.3■□□□□ 0.36
SRP9P49458 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.3■□□□□ 0.36
SRP9P49458 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRP9P49458 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
SRP9P49458 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRP9P49458 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 MIPEPP3-201ENST00000412105 444 ntBASIC17.29■□□□□ 0.36
SRP9P49458 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.29■□□□□ 0.36
SRP9P49458 HLA-L-209ENST00000420110 1011 ntBASIC17.29■□□□□ 0.36
SRP9P49458 AL355472.2-201ENST00000422958 438 ntBASIC17.29■□□□□ 0.36
SRP9P49458 MIR4758-201ENST00000577688 71 ntBASIC17.29■□□□□ 0.36
SRP9P49458 AC104771.1-201ENST00000603335 964 ntBASIC17.29■□□□□ 0.36
SRP9P49458 AC105020.6-201ENST00000621523 1217 ntBASIC17.29■□□□□ 0.36
SRP9P49458 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.29■□□□□ 0.36
SRP9P49458 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP9P49458 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRP9P49458 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRP9P49458 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SRP9P49458 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.28■□□□□ 0.36
SRP9P49458 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP9P49458 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRP9P49458 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP9P49458 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP9P49458 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.28■□□□□ 0.36
SRP9P49458 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.28■□□□□ 0.36
SRP9P49458 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP9P49458 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP9P49458 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP9P49458 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SRP9P49458 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms