Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.74■□□□□ 0.91
SSR1P43307 AP001271.2-201ENST00000624018 1556 ntBASIC20.74■□□□□ 0.91
SSR1P43307 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SSR1P43307 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 AC026471.1-201ENST00000564629 3026 ntBASIC20.74■□□□□ 0.91
SSR1P43307 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR1P43307 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR1P43307 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SSR1P43307 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SSR1P43307 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 SLC29A4P1-201ENST00000398760 971 ntBASIC20.73■□□□□ 0.91
SSR1P43307 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.73■□□□□ 0.91
SSR1P43307 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
SSR1P43307 AC087289.5-201ENST00000586076 3175 ntBASIC20.73■□□□□ 0.91
SSR1P43307 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR1P43307 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SSR1P43307 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SSR1P43307 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 TREX1-205ENST00000625293 1783 ntBASIC20.72■□□□□ 0.91
SSR1P43307 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SSR1P43307 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SSR1P43307 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SSR1P43307 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SSR1P43307 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.72■□□□□ 0.91
SSR1P43307 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.72■□□□□ 0.91
SSR1P43307 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.72■□□□□ 0.91
SSR1P43307 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.72■□□□□ 0.91
SSR1P43307 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.72■□□□□ 0.91
SSR1P43307 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.72■□□□□ 0.91
SSR1P43307 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SSR1P43307 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.72■□□□□ 0.91
SSR1P43307 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.72■□□□□ 0.91
SSR1P43307 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR1P43307 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.71■□□□□ 0.91
SSR1P43307 HTR7P1-202ENST00000624664 4411 ntBASIC20.71■□□□□ 0.91
SSR1P43307 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 AL390719.1-204ENST00000412397 1219 ntBASIC20.71■□□□□ 0.91
SSR1P43307 DUSP5P2-201ENST00000426873 1033 ntBASIC20.71■□□□□ 0.91
SSR1P43307 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.71■□□□□ 0.91
SSR1P43307 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SSR1P43307 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SSR1P43307 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SSR1P43307 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR1P43307 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.7■□□□□ 0.91
SSR1P43307 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.7■□□□□ 0.91
SSR1P43307 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SSR1P43307 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
SSR1P43307 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SSR1P43307 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SSR1P43307 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
SSR1P43307 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSR1P43307 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.7■□□□□ 0.9
SSR1P43307 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.7■□□□□ 0.9
SSR1P43307 AC092666.2-201ENST00000613287 246 ntBASIC20.7■□□□□ 0.9
SSR1P43307 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SSR1P43307 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms