Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC14.28□□□□□ -0.128e-7■■■■□ 20.7
MATR3P43243 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC12.45□□□□□ -0.428e-7■■■■□ 20.7
MATR3P43243 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.138e-7■■■■□ 20.7
MATR3P43243 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.298e-7■■■■□ 20.7
MATR3P43243 DIRC3-204ENST00000486365 2582 ntTSL 510.93□□□□□ -0.662e-7■■■■□ 20.7
MATR3P43243 KMT2A-209ENST00000531904 4320 ntTSL 221.23■□□□□ 0.991e-6■■■■□ 20.7
MATR3P43243 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.833e-6■■■■□ 20.7
MATR3P43243 KMT2A-206ENST00000527869 481 ntTSL 319.62■□□□□ 0.731e-6■■■■□ 20.7
MATR3P43243 KMT2A-211ENST00000533790 804 ntTSL 219.62■□□□□ 0.731e-6■■■■□ 20.7
MATR3P43243 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.443e-6■■■■□ 20.7
MATR3P43243 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.251e-6■■■■□ 20.7
MATR3P43243 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.911e-6■■■■□ 20.7
MATR3P43243 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.043e-8■■■■□ 20.7
MATR3P43243 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.043e-8■■■■□ 20.7
MATR3P43243 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.183e-8■■■■□ 20.7
MATR3P43243 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC12.89□□□□□ -0.353e-8■■■■□ 20.7
MATR3P43243 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC11.47□□□□□ -0.573e-8■■■■□ 20.7
MATR3P43243 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.673e-8■■■■□ 20.7
MATR3P43243 GLMN-205ENST00000495106 1833 ntTSL 1 (best)3.65□□□□□ -1.822e-6■■■■□ 20.7
MATR3P43243 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.042e-6■■■■□ 20.7
MATR3P43243 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.092e-6■■■■□ 20.7
MATR3P43243 GPCPD1-205ENST00000481038 6649 ntTSL 25.1□□□□□ -1.592e-6■■■■□ 20.7
MATR3P43243 GPCPD1-202ENST00000418646 4015 ntTSL 54.69□□□□□ -1.662e-6■■■■□ 20.7
MATR3P43243 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.731e-6■■■■□ 20.7
MATR3P43243 TOP2B-203ENST00000424225 3525 ntTSL 1 (best)14.46□□□□□ -0.11e-6■■■■□ 20.7
MATR3P43243 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.31e-6■■■■□ 20.7
MATR3P43243 HSD17B12-206ENST00000531185 611 ntTSL 418.08■□□□□ 0.482e-6■■■■□ 20.7
MATR3P43243 HSD17B12-205ENST00000527433 559 ntTSL 415.59■□□□□ 0.092e-6■■■■□ 20.7
MATR3P43243 AC068205.2-203ENST00000529261 748 ntTSL 310.42□□□□□ -0.742e-6■■■■□ 20.7
MATR3P43243 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.76□□□□□ -1.172e-6■■■■□ 20.7
MATR3P43243 HSD17B12-214ENST00000638034 546 ntTSL 54.72□□□□□ -1.652e-6■■■■□ 20.7
MATR3P43243 C1GALT1-206ENST00000467716 458 ntTSL 519.17■□□□□ 0.662e-7■■■■□ 20.6
MATR3P43243 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.231e-6■■■■□ 20.6
MATR3P43243 RHOBTB3-207ENST00000506959 547 ntTSL 514.39□□□□□ -0.111e-6■■■■□ 20.6
MATR3P43243 RHOBTB3-205ENST00000504949 1511 ntTSL 212.96□□□□□ -0.331e-6■■■■□ 20.6
MATR3P43243 RHOBTB3-202ENST00000502541 693 ntTSL 56.2□□□□□ -1.421e-6■■■■□ 20.6
MATR3P43243 RHOBTB3-211ENST00000510623 333 ntTSL 24.88□□□□□ -1.631e-6■■■■□ 20.6
MATR3P43243 MBD5-206ENST00000473478 484 ntTSL 411.65□□□□□ -0.542e-6■■■■□ 20.6
MATR3P43243 MBD5-225ENST00000637445 958 ntTSL 59.6□□□□□ -0.872e-6■■■■□ 20.6
MATR3P43243 MBD5-205ENST00000470063 324 ntTSL 39.6□□□□□ -0.872e-6■■■■□ 20.6
MATR3P43243 MBD5-216ENST00000635796 1371 ntTSL 54.78□□□□□ -1.642e-6■■■■□ 20.6
MATR3P43243 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.59■■□□□ 1.374e-7■■■■□ 20.6
MATR3P43243 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)17.24■□□□□ 0.354e-7■■■■□ 20.6
MATR3P43243 NUBPL-204ENST00000548937 578 ntTSL 318.33■□□□□ 0.522e-6■■■■□ 20.6
MATR3P43243 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-7■■■■□ 20.6
MATR3P43243 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.162e-7■■■■□ 20.6
MATR3P43243 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.82e-7■■■■□ 20.6
MATR3P43243 ANKRD17-208ENST00000559367 539 ntTSL 57.98□□□□□ -1.138e-7■■■■□ 20.6
MATR3P43243 AC130895.1-201ENST00000549373 493 ntTSL 5 BASIC12.03□□□□□ -0.486e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-209ENST00000472150 675 ntTSL 318.18■□□□□ 0.55e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC15.48■□□□□ 0.075e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.255e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-207ENST00000446003 3859 ntTSL 1 (best)13.47□□□□□ -0.255e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-211ENST00000476499 1612 ntTSL 213.16□□□□□ -0.35e-7■■■■□ 20.6
MATR3P43243 AGAP1-208ENST00000448025 757 ntTSL 59.96□□□□□ -0.824e-7■■■■□ 20.6
MATR3P43243 AGAP1-206ENST00000418654 826 ntTSL 39.67□□□□□ -0.864e-7■■■■□ 20.6
MATR3P43243 DIRC3-202ENST00000474063 3078 ntTSL 28.99□□□□□ -0.975e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.64□□□□□ -1.195e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.37□□□□□ -1.395e-7■■■■□ 20.6
MATR3P43243 ARHGAP21-204ENST00000416305 801 ntTSL 53.24□□□□□ -1.895e-7■■■■□ 20.6
MATR3P43243 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)13.75□□□□□ -0.212e-7■■■■□ 20.6
MATR3P43243 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC10.46□□□□□ -0.736e-22■■■■□ 20.6
MATR3P43243 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.883e-6■■■■□ 20.6
MATR3P43243 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.51■□□□□ 0.552e-6■■■■□ 20.6
MATR3P43243 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.682e-6■■■■□ 20.6
MATR3P43243 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.75□□□□□ -1.972e-6■■■■□ 20.6
MATR3P43243 RBPJ-211ENST00000505958 758 ntTSL 518.2■□□□□ 0.52e-6■■■■□ 20.6
MATR3P43243 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.62□□□□□ -1.192e-6■■■■□ 20.6
MATR3P43243 KDM4C-201ENST00000381306 4601 ntTSL 2 BASIC11.74□□□□□ -0.532e-6■■■■□ 20.6
MATR3P43243 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.712e-6■■■■□ 20.6
MATR3P43243 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.93□□□□□ -1.142e-6■■■■□ 20.6
MATR3P43243 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.31□□□□□ -1.42e-6■■■■□ 20.6
MATR3P43243 ASPH-229ENST00000524173 587 ntTSL 43.83□□□□□ -1.84e-6■■■■□ 20.6
MATR3P43243 MAP3K7-204ENST00000369329 4911 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.362e-7■■■■□ 20.6
MATR3P43243 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.382e-7■■■■□ 20.6
MATR3P43243 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.14□□□□□ -1.432e-7■■■■□ 20.6
MATR3P43243 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.782e-7■■■■□ 20.6
MATR3P43243 TRIO-204ENST00000502816 736 ntTSL 227.03■■□□□ 1.921e-6■■■■□ 20.5
MATR3P43243 TRIO-207ENST00000505971 605 ntTSL 322.14■■□□□ 1.131e-6■■■■□ 20.5
MATR3P43243 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.597e-7■■■■□ 20.5
MATR3P43243 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.217e-7■■■■□ 20.5
MATR3P43243 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.017e-7■■■■□ 20.5
MATR3P43243 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.197e-7■■■■□ 20.5
MATR3P43243 PRELID2-208ENST00000515161 419 ntTSL 39.57□□□□□ -0.881e-6■■■■□ 20.5
MATR3P43243 PRELID2-206ENST00000510594 552 ntTSL 39.36□□□□□ -0.911e-6■■■■□ 20.5
MATR3P43243 PRELID2-205ENST00000510259 525 ntTSL 32.52□□□□□ -2.011e-6■■■■□ 20.5
MATR3P43243 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.543e-7■■■■□ 20.5
MATR3P43243 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.624e-8■■■■□ 20.5
MATR3P43243 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.884e-8■■■■□ 20.5
MATR3P43243 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.94e-8■■■■□ 20.5
MATR3P43243 C1GALT1-203ENST00000419721 591 ntTSL 322.82■■□□□ 1.242e-7■■■■□ 20.5
MATR3P43243 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.12e-7■■■■□ 20.5
MATR3P43243 AMBRA1-205ENST00000526606 522 ntTSL 421.11■□□□□ 0.976e-7■■■■□ 20.5
MATR3P43243 AMBRA1-210ENST00000531542 561 ntTSL 314.49□□□□□ -0.096e-7■■■■□ 20.5
MATR3P43243 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.189e-7■■■■□ 20.5
MATR3P43243 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC13.83□□□□□ -0.29e-7■■■■□ 20.5
MATR3P43243 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC13.05□□□□□ -0.329e-7■■■■□ 20.5
MATR3P43243 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC12.47□□□□□ -0.419e-7■■■■□ 20.5
MATR3P43243 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC10□□□□□ -0.819e-7■■■■□ 20.5
MATR3P43243 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.593e-8■■■■□ 20.5
Retrieved 100 of 16,209 protein–RNA pairs in 19.3 ms