RNA–Protein interactions for RNA: ENST00000536108.5

KDM4C-214, Transcript of lysine demethylase 4C, humanhuman

TSL 1 (best) BASIC

Gene KDM4C, Length 3,406 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-214ENST00000536108 NISCHQ9Y2I1 1504 aa12.03□□□□□ -0.48
KDM4C-214ENST00000536108 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
KDM4C-214ENST00000536108 ZCCHC6Q5VYS8 1495 aaKnown RBP10.22□□□□□ -0.77
KDM4C-214ENST00000536108 DCAF1Q9Y4B6 1507 aa10.03□□□□□ -0.8
KDM4C-214ENST00000536108 SHROOM4Q9ULL8 1493 aa9.95□□□□□ -0.82
KDM4C-214ENST00000536108 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
KDM4C-214ENST00000536108 MYO15BQ96JP2 1530 aa9.76□□□□□ -0.85
KDM4C-214ENST00000536108 CHIC1Q5VXU3 224 aa9.75□□□□□ -0.85
KDM4C-214ENST00000536108 ABCC9O60706 1549 aa9.67□□□□□ -0.86
KDM4C-214ENST00000536108 HRCP23327 699 aa9.62□□□□□ -0.87
KDM4C-214ENST00000536108 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
KDM4C-214ENST00000536108 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
KDM4C-214ENST00000536108 RB1CC1Q8TDY2 1594 aa9.48□□□□□ -0.89
KDM4C-214ENST00000536108 NACADO15069 1562 aa9.46□□□□□ -0.9
KDM4C-214ENST00000536108 SCRIBQ14160 1630 aa9.44□□□□□ -0.9
KDM4C-214ENST00000536108 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
KDM4C-214ENST00000536108 TRIM26Q12899 539 aaPredicted RBP9.35□□□□□ -0.91
KDM4C-214ENST00000536108 LOC105371045A0A1W2PR82 267 aa9.33□□□□□ -0.92
KDM4C-214ENST00000536108 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
KDM4C-214ENST00000536108 BAZ1AQ9NRL2 1556 aaPredicted RBP9.3□□□□□ -0.92
KDM4C-214ENST00000536108 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
KDM4C-214ENST00000536108 CECR2Q9BXF3 1484 aa9.26□□□□□ -0.93
KDM4C-214ENST00000536108 WIZO95785 1651 aa9.25□□□□□ -0.93
KDM4C-214ENST00000536108 ZEB1P37275 1124 aaPredicted RBP9.24□□□□□ -0.93
KDM4C-214ENST00000536108 PPARGC1BQ86YN6 1023 aaKnown RBP9.22□□□□□ -0.93
KDM4C-214ENST00000536108 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
KDM4C-214ENST00000536108 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
KDM4C-214ENST00000536108 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
KDM4C-214ENST00000536108 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
KDM4C-214ENST00000536108 SMARCA2P51531 1590 aa9.11□□□□□ -0.95
KDM4C-214ENST00000536108 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
KDM4C-214ENST00000536108 PEG3Q9GZU2 1588 aa9.09□□□□□ -0.95
KDM4C-214ENST00000536108 CCDC88BA6NC98 1476 aa9.07□□□□□ -0.96
KDM4C-214ENST00000536108 EEA1Q15075 1411 aa9.06□□□□□ -0.96
KDM4C-214ENST00000536108 TNIKQ9UKE5 1360 aa9.01□□□□□ -0.97
KDM4C-214ENST00000536108 ABCC8Q09428 1581 aa9□□□□□ -0.97
KDM4C-214ENST00000536108 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
KDM4C-214ENST00000536108 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
KDM4C-214ENST00000536108 KIF21BO75037 1637 aa8.96□□□□□ -0.98
KDM4C-214ENST00000536108 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
KDM4C-214ENST00000536108 SOGA1O94964 1423 aa8.92□□□□□ -0.98
KDM4C-214ENST00000536108 GOLGA3Q08378 1498 aa8.92□□□□□ -0.98
KDM4C-214ENST00000536108 PELP1Q8IZL8 1130 aaKnown RBP8.91□□□□□ -0.98
KDM4C-214ENST00000536108 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
KDM4C-214ENST00000536108 SYNJ1O43426 1573 aa8.87□□□□□ -0.99
KDM4C-214ENST00000536108 CSRNP3Q8WYN3 585 aa8.87□□□□□ -0.99
KDM4C-214ENST00000536108 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
KDM4C-214ENST00000536108 RUSC2Q8N2Y8 1516 aa8.87□□□□□ -0.99
KDM4C-214ENST00000536108 SCAF1Q9H7N4 1312 aaKnown RBP8.85□□□□□ -0.99
KDM4C-214ENST00000536108 ATAD2BQ9ULI0 1458 aa8.85□□□□□ -0.99
KDM4C-214ENST00000536108 BIVM-ERCC5R4GMW8 1640 aa8.85□□□□□ -0.99
KDM4C-214ENST00000536108 TOP2BQ02880 1626 aa8.83□□□□□ -1
KDM4C-214ENST00000536108 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
KDM4C-214ENST00000536108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.8□□□□□ -1
KDM4C-214ENST00000536108 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
KDM4C-214ENST00000536108 VPS8Q8N3P4 1428 aa8.79□□□□□ -1
KDM4C-214ENST00000536108 ACIN1Q9UKV3 1341 aaKnown RBP8.78□□□□□ -1
KDM4C-214ENST00000536108 HMGXB3Q12766 1538 aa8.77□□□□□ -1.01
KDM4C-214ENST00000536108 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
KDM4C-214ENST00000536108 CLIP1P30622 1438 aa8.76□□□□□ -1.01
KDM4C-214ENST00000536108 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
KDM4C-214ENST00000536108 PRXQ9BXM0 1461 aa8.74□□□□□ -1.01
KDM4C-214ENST00000536108 PRDM2Q13029 1718 aa8.73□□□□□ -1.01
KDM4C-214ENST00000536108 RAPGEF2Q9Y4G8 1499 aa8.73□□□□□ -1.01
KDM4C-214ENST00000536108 NCAPD3P42695 1498 aa8.71□□□□□ -1.01
KDM4C-214ENST00000536108 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.01
KDM4C-214ENST00000536108 UBTFP17480 764 aaKnown RBP8.71□□□□□ -1.01
KDM4C-214ENST00000536108 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
KDM4C-214ENST00000536108 NEUROD1Q13562 356 aa8.7□□□□□ -1.02
KDM4C-214ENST00000536108 CUX2O14529 1486 aa8.69□□□□□ -1.02
KDM4C-214ENST00000536108 CENPBP07199 599 aaPredicted RBP8.69□□□□□ -1.02
KDM4C-214ENST00000536108 ARAP1Q96P48 1450 aa8.68□□□□□ -1.02
KDM4C-214ENST00000536108 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
KDM4C-214ENST00000536108 CUX1P39880 1505 aa8.66□□□□□ -1.02
KDM4C-214ENST00000536108 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
KDM4C-214ENST00000536108 CFTRP13569 1480 aa8.65□□□□□ -1.02
KDM4C-214ENST00000536108 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
KDM4C-214ENST00000536108 KIF27Q86VH2 1401 aa8.6□□□□□ -1.03
KDM4C-214ENST00000536108 DHX57Q6P158 1386 aaKnown RBP8.6□□□□□ -1.03
KDM4C-214ENST00000536108 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
KDM4C-214ENST00000536108 ARHGAP35Q9NRY4 1499 aa8.57□□□□□ -1.04
KDM4C-214ENST00000536108 APLP2Q06481 763 aa8.56□□□□□ -1.04
KDM4C-214ENST00000536108 CFAP43Q8NDM7 1665 aa8.54□□□□□ -1.04
KDM4C-214ENST00000536108 TIAM1Q13009 1591 aa8.54□□□□□ -1.04
KDM4C-214ENST00000536108 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
KDM4C-214ENST00000536108 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
KDM4C-214ENST00000536108 MIER1Q8N108 512 aa8.53□□□□□ -1.04
KDM4C-214ENST00000536108 MYT1Q01538 1121 aa8.52□□□□□ -1.05
KDM4C-214ENST00000536108 IGF1RP08069 1367 aa8.51□□□□□ -1.05
KDM4C-214ENST00000536108 CCNB3Q8WWL7 1395 aa8.51□□□□□ -1.05
KDM4C-214ENST00000536108 KANK4Q5T7N3 995 aaPredicted RBP8.5□□□□□ -1.05
KDM4C-214ENST00000536108 MAPKBP1O60336 1514 aa8.49□□□□□ -1.05
KDM4C-214ENST00000536108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.48□□□□□ -1.05
KDM4C-214ENST00000536108 AQRO60306 1485 aaKnown RBP eCLIP8.48□□□□□ -1.053e-7■■■■■ 36.6
KDM4C-214ENST00000536108 LRRC9Q6ZRR7 1453 aa8.48□□□□□ -1.05
KDM4C-214ENST00000536108 CC2D2AQ9P2K1 1620 aa8.47□□□□□ -1.05
KDM4C-214ENST00000536108 CADPSQ9ULU8 1353 aa8.47□□□□□ -1.05
KDM4C-214ENST00000536108 EFCAB5A4FU69 1503 aa8.47□□□□□ -1.05
KDM4C-214ENST00000536108 CUL7Q14999 1698 aa8.46□□□□□ -1.06
KDM4C-214ENST00000536108 FHAD1B1AJZ9 1412 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms