RNA–Protein interactions for RNA: ENST00000380650.4

RPAP3-202, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene RPAP3, Length 2,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-202ENST00000380650 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
RPAP3-202ENST00000380650 CHIC1Q5VXU3 224 aa13.82□□□□□ -0.2
RPAP3-202ENST00000380650 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
RPAP3-202ENST00000380650 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
RPAP3-202ENST00000380650 FOXD1Q16676 465 aa11.32□□□□□ -0.6
RPAP3-202ENST00000380650 PLPPR3Q6T4P5 718 aa11.14□□□□□ -0.63
RPAP3-202ENST00000380650 POTEDQ86YR6 584 aa10.9□□□□□ -0.67
RPAP3-202ENST00000380650 DNAJC5Q9H3Z4 198 aa10.75□□□□□ -0.69
RPAP3-202ENST00000380650 PPP6R1Q9UPN7 881 aa10.72□□□□□ -0.69
RPAP3-202ENST00000380650 ADRA2BP18089 450 aa10.69□□□□□ -0.7
RPAP3-202ENST00000380650 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
RPAP3-202ENST00000380650 MSH5O43196 834 aa10.56□□□□□ -0.72
RPAP3-202ENST00000380650 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
RPAP3-202ENST00000380650 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
RPAP3-202ENST00000380650 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.84
RPAP3-202ENST00000380650 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
RPAP3-202ENST00000380650 DMRT2Q9Y5R5 561 aa9.71□□□□□ -0.85
RPAP3-202ENST00000380650 CNKSR2Q8WXI2 1034 aa9.57□□□□□ -0.88
RPAP3-202ENST00000380650 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
RPAP3-202ENST00000380650 HOXD11P31277 338 aaPredicted RBP9.45□□□□□ -0.9
RPAP3-202ENST00000380650 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
RPAP3-202ENST00000380650 NPM3O75607 178 aaKnown RBP9.32□□□□□ -0.92
RPAP3-202ENST00000380650 KCNA4P22459 653 aa9.3□□□□□ -0.92
RPAP3-202ENST00000380650 SOCS7O14512 581 aa9.25□□□□□ -0.93
RPAP3-202ENST00000380650 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
RPAP3-202ENST00000380650 DNAJC5BQ9UF47 199 aa9.17□□□□□ -0.94
RPAP3-202ENST00000380650 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
RPAP3-202ENST00000380650 RNF39Q9H2S5 420 aa9.01□□□□□ -0.97
RPAP3-202ENST00000380650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.97□□□□□ -0.97
RPAP3-202ENST00000380650 LMTK3Q96Q04 1460 aa8.96□□□□□ -0.98
RPAP3-202ENST00000380650 C1QBPQ07021 282 aaKnown RBP8.91□□□□□ -0.98
RPAP3-202ENST00000380650 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
RPAP3-202ENST00000380650 SLC4A1APQ9BWU0 796 aaKnown RBP8.85□□□□□ -0.99
RPAP3-202ENST00000380650 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
RPAP3-202ENST00000380650 U3KPZ7 1027 aaPredicted RBP8.8□□□□□ -1
RPAP3-202ENST00000380650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.68□□□□□ -1.02
RPAP3-202ENST00000380650 HNRNPUL2Q1KMD3 747 aaKnown RBP8.68□□□□□ -1.02
RPAP3-202ENST00000380650 APLP2Q06481 763 aa8.66□□□□□ -1.02
RPAP3-202ENST00000380650 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
RPAP3-202ENST00000380650 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.03
RPAP3-202ENST00000380650 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
RPAP3-202ENST00000380650 SPINK5Q9NQ38 1064 aaPredicted RBP8.59□□□□□ -1.03
RPAP3-202ENST00000380650 CAPN15O75808 1086 aa8.57□□□□□ -1.04
RPAP3-202ENST00000380650 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
RPAP3-202ENST00000380650 ILDR2Q71H61 639 aa8.57□□□□□ -1.04
RPAP3-202ENST00000380650 ZBTB22O15209 634 aa8.55□□□□□ -1.04
RPAP3-202ENST00000380650 ZNF219Q9P2Y4 722 aaPredicted RBP8.53□□□□□ -1.04
RPAP3-202ENST00000380650 DSG3P32926 999 aa8.49□□□□□ -1.05
RPAP3-202ENST00000380650 TRHP20396 242 aaPredicted RBP8.47□□□□□ -1.05
RPAP3-202ENST00000380650 ATXN8OSP0DMR3 200 aa8.42□□□□□ -1.06
RPAP3-202ENST00000380650 ABCB7O75027 752 aa8.38□□□□□ -1.07
RPAP3-202ENST00000380650 ATF5Q9Y2D1 282 aaPredicted RBP8.37□□□□□ -1.07
RPAP3-202ENST00000380650 CSRNP3Q8WYN3 585 aa8.36□□□□□ -1.07
RPAP3-202ENST00000380650 POTEHQ6S545 545 aa8.33□□□□□ -1.08
RPAP3-202ENST00000380650 EHMT2Q96KQ7 1210 aa8.32□□□□□ -1.08
RPAP3-202ENST00000380650 POLA2Q14181 598 aa8.31□□□□□ -1.08
RPAP3-202ENST00000380650 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
RPAP3-202ENST00000380650 ZBTB12Q9Y330 459 aaPredicted RBP8.23□□□□□ -1.09
RPAP3-202ENST00000380650 FBXO41Q8TF61 875 aa8.18□□□□□ -1.1
RPAP3-202ENST00000380650 SLC34A2O95436 690 aa8.18□□□□□ -1.1
RPAP3-202ENST00000380650 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
RPAP3-202ENST00000380650 DISP3Q9P2K9 1392 aa8.11□□□□□ -1.11
RPAP3-202ENST00000380650 FBLN2P98095 1184 aa8.09□□□□□ -1.11
RPAP3-202ENST00000380650 OSCARQ8IYS5 282 aa8.03□□□□□ -1.12
RPAP3-202ENST00000380650 MKRN4PQ13434 485 aaPredicted RBP8.02□□□□□ -1.13
RPAP3-202ENST00000380650 AKT1S1Q96B36 256 aa7.99□□□□□ -1.13
RPAP3-202ENST00000380650 SPDYE2BA6NHP3 402 aa7.97□□□□□ -1.13
RPAP3-202ENST00000380650 SPDYE6P0CI01 402 aa7.97□□□□□ -1.13
RPAP3-202ENST00000380650 SPDYE2Q495Y8 402 aa7.97□□□□□ -1.13
RPAP3-202ENST00000380650 REM2Q8IYK8 340 aaPredicted RBP7.88□□□□□ -1.15
RPAP3-202ENST00000380650 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
RPAP3-202ENST00000380650 ZNF692Q9BU19 519 aaPredicted RBP7.87□□□□□ -1.15
RPAP3-202ENST00000380650 IGSF5Q9NSI5 407 aa7.87□□□□□ -1.15
RPAP3-202ENST00000380650 CHRDL2Q6WN34 429 aa7.84□□□□□ -1.15
RPAP3-202ENST00000380650 PITPNM1O00562 1244 aa7.79□□□□□ -1.16
RPAP3-202ENST00000380650 SPDYE1Q8NFV5 336 aaPredicted RBP7.78□□□□□ -1.16
RPAP3-202ENST00000380650 PABPN1Q86U42 306 aaKnown RBP eCLIP7.76□□□□□ -1.17
RPAP3-202ENST00000380650 SPDYE4A6NLX3 237 aa7.75□□□□□ -1.17
RPAP3-202ENST00000380650 SPATA31D1Q6ZQQ2 1576 aa7.72□□□□□ -1.17
RPAP3-202ENST00000380650 ERCC6L2Q5T890 1561 aa7.71□□□□□ -1.18
RPAP3-202ENST00000380650 FXR2P51116 673 aaKnown RBP eCLIP7.7□□□□□ -1.18
RPAP3-202ENST00000380650 PIP4P2Q8N4L2 257 aa7.69□□□□□ -1.18
RPAP3-202ENST00000380650 CLEC11AQ9Y240 323 aa7.69□□□□□ -1.18
RPAP3-202ENST00000380650 PLSCR2Q9NRY7 297 aa7.65□□□□□ -1.18
RPAP3-202ENST00000380650 PROM2Q8N271 834 aa7.64□□□□□ -1.19
RPAP3-202ENST00000380650 SP7Q8TDD2 431 aaPredicted RBP7.64□□□□□ -1.19
RPAP3-202ENST00000380650 STAG3Q9UJ98 1225 aa7.64□□□□□ -1.19
RPAP3-202ENST00000380650 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
RPAP3-202ENST00000380650 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
RPAP3-202ENST00000380650 FKBP8Q14318 412 aa7.55□□□□□ -1.2
RPAP3-202ENST00000380650 CHADLQ6NUI6 762 aa7.51□□□□□ -1.21
RPAP3-202ENST00000380650 CREBZFQ9NS37 354 aa7.49□□□□□ -1.21
RPAP3-202ENST00000380650 HAX1O00165 279 aa7.48□□□□□ -1.21
RPAP3-202ENST00000380650 FARP1Q9Y4F1 1045 aaPredicted RBP7.47□□□□□ -1.21
RPAP3-202ENST00000380650 C19orf67A6NJJ6 358 aa7.45□□□□□ -1.22
RPAP3-202ENST00000380650 FBXO3Q9UK99 471 aa7.4□□□□□ -1.22
RPAP3-202ENST00000380650 NPM1P06748 294 aaKnown RBP eCLIP7.39□□□□□ -1.23
RPAP3-202ENST00000380650 MNX1P50219 401 aaPredicted RBP7.39□□□□□ -1.23
RPAP3-202ENST00000380650 PLEKHG5O94827 1062 aa7.38□□□□□ -1.23
RPAP3-202ENST00000380650 EVX2Q03828 476 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms