Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTNNA1P35221 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CTNNA1P35221 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNNA1P35221 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNNA1P35221 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.61■□□□□ 0.89
CTNNA1P35221 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNNA1P35221 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNNA1P35221 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNNA1P35221 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNA1P35221 AC133552.2-202ENST00000575694 574 ntBASIC20.61■□□□□ 0.89
CTNNA1P35221 AC022517.1-201ENST00000592429 346 ntBASIC20.61■□□□□ 0.89
CTNNA1P35221 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNA1P35221 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CTNNA1P35221 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CTNNA1P35221 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNNA1P35221 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNNA1P35221 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTNNA1P35221 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
CTNNA1P35221 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTNNA1P35221 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.6■□□□□ 0.89
CTNNA1P35221 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.6■□□□□ 0.89
CTNNA1P35221 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNNA1P35221 GPX1P1-201ENST00000388829 606 ntBASIC20.6■□□□□ 0.89
CTNNA1P35221 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNNA1P35221 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.6■□□□□ 0.89
CTNNA1P35221 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNNA1P35221 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNNA1P35221 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTNNA1P35221 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNNA1P35221 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNNA1P35221 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 NEFHP1-201ENST00000412845 2629 ntBASIC20.59■□□□□ 0.89
CTNNA1P35221 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CTNNA1P35221 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CTNNA1P35221 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTNNA1P35221 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.59■□□□□ 0.89
CTNNA1P35221 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNNA1P35221 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CTNNA1P35221 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNNA1P35221 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CTNNA1P35221 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CTNNA1P35221 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNNA1P35221 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CTNNA1P35221 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNNA1P35221 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms