Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP11P24347 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.57■□□□□ 0.56
MMP11P24347 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MMP11P24347 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP11P24347 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.56■□□□□ 0.56
MMP11P24347 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP11P24347 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
MMP11P24347 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MMP11P24347 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.56■□□□□ 0.56
MMP11P24347 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP11P24347 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP11P24347 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.56■□□□□ 0.56
MMP11P24347 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP11P24347 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP11P24347 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.56■□□□□ 0.56
MMP11P24347 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP11P24347 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP11P24347 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP11P24347 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MMP11P24347 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
MMP11P24347 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MMP11P24347 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
MMP11P24347 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MMP11P24347 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP11P24347 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.55■□□□□ 0.56
MMP11P24347 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.55■□□□□ 0.56
MMP11P24347 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP11P24347 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 REXO1L12P-201ENST00000622156 912 ntBASIC18.55■□□□□ 0.56
MMP11P24347 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.55■□□□□ 0.56
MMP11P24347 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MMP11P24347 KRT16P6-202ENST00000425692 1426 ntBASIC18.55■□□□□ 0.56
MMP11P24347 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP11P24347 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MMP11P24347 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP11P24347 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
MMP11P24347 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP11P24347 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 BX088651.1-201ENST00000540551 451 ntBASIC18.54■□□□□ 0.56
MMP11P24347 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MMP11P24347 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
MMP11P24347 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MMP11P24347 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP11P24347 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.54■□□□□ 0.56
MMP11P24347 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP11P24347 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.54■□□□□ 0.56
MMP11P24347 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
MMP11P24347 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP11P24347 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP11P24347 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.54■□□□□ 0.56
MMP11P24347 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MMP11P24347 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MMP11P24347 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms